Evidence map›Paper›PMID 26244515›Full record

ArticlePloS one2015

DNA Sequence Variants in the Five Prime Untranslated Region of the Cyclooxygenase-2 Gene Are Commonly Found in Healthy Dogs and Gray Wolves.

Noa Safra, Louisa J Hayward, Miriam Aguilar, Benjamin N Sacks, Jodi L Westropp, F Charles Mohr, Cathryn S Mellersh, Danika L Bannasch

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.6field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Noa SafraDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California Davis, Davis, California, United States of America.
Louisa J HaywardAnimal Health Trust, Newmarket, United Kingdom.
Miriam AguilarDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California Davis, Davis, California, United States of America.
Benjamin N SacksVeterinary Genetics Laboratory, School of Veterinary Medicine, University of California Davis, Davis, California United States of America.
Jodi L WestroppDepartment of Veterinary Medicine and Epidemiology, School of Veterinary Medicine, University of California Davis, Davis, California, United States of America.
F Charles MohrDepartment of Pathology, Microbiology and Immunology, School of Veterinary Medicine, University of California Davis, Davis, California, United States of America.
Cathryn S MellershAnimal Health Trust, Newmarket, United Kingdom.
Danika L BannaschDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California Davis, Davis, California, United States of America.
University of California, Davis · USAnimal Health Trust · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to investigate the frequency of regional DNA variants upstream to the translation initiation site of the canine Cyclooxygenase-2 (Cox-2) gene in healthy dogs. Cox-2 plays a role in various disease conditions such as acute and chronic inflammation, osteoarthritis and malignancy. A role for Cox-2 DNA variants in genetic predisposition to canine renal dysplasia has been proposed and dog breeders have been encouraged to select against these DNA variants. We sequenced 272-422 bases in 152 dogs unaffected by renal dysplasia and found 19 different haplotypes including 11 genetic variants which had not been described previously. We genotyped 7 gray wolves to ascertain the wildtype variant and found that the wolves we analyzed had predominantly the second most common DNA variant found in dogs. Our results demonstrate an elevated level of regional polymorphism that appears to be a feature of healthy domesticated dogs.

Indexed as

5' Untranslated RegionsGenetic VariationGenotypeAllelesAnimalsCyclooxygenase 2DogsHaplotypesMolecular Sequence DataWolves5' Untranslated RegionsCyclooxygenase 2

Identifiers

PMID26244515
PMCPMC4526539
OpenAlexW2342366935

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.