Evidence map›Paper›PMID 26242966›Full record

ArticleEnvironmental microbiology2016

Redundant synthesis of a conidial polyketide by two distinct secondary metabolite clusters in Aspergillus fumigatus.

Kurt Throckmorton, Fang Yun Lim, Dimitrios P Kontoyiannis, Weifa Zheng, Nancy P Keller

Open access · greenAbstract read
In one paragraph

Article in Environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 45 papers.

0numbers the graph read from it
0cells of the map it votes in
45citing papers in PubMed
6.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

45 citing papers in PubMed, 76 citations in OpenAlex.

  1. Opportunistic pathogenicity in fungi can transcend species boundaries.bioRxiv : the preprint server for biology · 2026
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  4. Review
  5. Article
  6. Article
  7. A Timeline of Biosynthetic Gene Cluster Discovery inJournal of fungi (Basel, Switzerland) · 2024
    Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Genome Mining and Analysis of PKS Genes inJournal of fungi (Basel, Switzerland) · 2022
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Comparative Genomics of EightInternational journal of molecular sciences · 2021
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Kurt ThrockmortonDepartment of Genetics, University of Wisconsin - Madison, Madison, WI, USA.
Fang Yun LimDepartment of Medical Microbiology and Immunology, University of Wisconsin - Madison, Madison, WI, USA.
Dimitrios P KontoyiannisThe University of Texas MD Anderson Cancer Center, Houston, TX, USA.
Weifa ZhengDepartment of Medical Microbiology and Immunology, University of Wisconsin - Madison, Madison, WI, USA.
Nancy P KellerDepartment of Medical Microbiology and Immunology, University of Wisconsin - Madison, Madison, WI, USA.
University of Wisconsin–Madison · USJiangsu Normal University · CNThe University of Texas MD Anderson Cancer Center · US

Funding

PREDOCTORAL TRAINING PROGRAM IN GENETICST32GM007133 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PERNA, NICOLE T · 1985 to 2023
$16.5M
Mechanisms of an Aspergillus fumigatus virulence mutantR01AI065728 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI KELLER, NANCY P · 2006 to 2017
$3.6M
NIAID NIH HHS R01 AI065728NIGMS NIH HHS 5T32GM07133NIGMS NIH HHS T32 GM007133
6 · The paper itself

Abstract

Filamentous fungi are renowned for the production of bioactive secondary metabolites. Typically, one distinct metabolite is generated from a specific secondary metabolite cluster. Here, we characterize the newly described trypacidin (tpc) cluster in the opportunistic human pathogen Aspergillus fumigatus. We find that this cluster as well as the previously characterized endocrocin (enc) cluster both contribute to the production of the spore metabolite endocrocin. Whereas trypacidin is eliminated when only tpc cluster genes are deleted, endocrocin production is only eliminated when both the tpc and enc non-reducing polyketide synthase-encoding genes, tpcC and encA, respectively, are deleted. EncC, an anthrone oxidase, converts the product released from EncA to endocrocin as a final product. In contrast, endocrocin synthesis by the tpc cluster likely results from incomplete catalysis by TpcK (a putative decarboxylase), as its deletion results in a nearly 10-fold increase in endocrocin production. We suggest endocrocin is likely a shunt product in all related non-reducing polyketide synthase clusters containing homologues of TpcK and TpcL (a putative anthrone oxidase), e.g. geodin and monodictyphenone. This finding represents an unusual example of two physically discrete secondary metabolite clusters generating the same natural product in one fungal species by distinct routes.

Indexed as

AnthracenesAnthronesAspergillus fumigatusCarboxy-LyasesMultigene FamilyOxidoreductasesPolyketidesPolyketide SynthasesSequence DeletionSpores, FungalAnthracenesanthroneAnthronesCarboxy-LyasesendocrocinOxidoreductasesPolyketidesPolyketide Synthases

Identifiers

PMID26242966
PMCPMC4750049
OpenAlexW1907781331

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.