Evidence map›Paper›PMID 26242913›Full record

ArticleThe Journal of biological chemistry2015

Phosphorylation-induced Conformational Ensemble Switching in an Intrinsically Disordered Cancer/Testis Antigen.

Yanan He, Yihong Chen, Steven M Mooney, Krithika Rajagopalan, Ajay Bhargava, Elizabeth Sacho, Keith Weninger, Philip N Bryan, Prakash Kulkarni, John Orban

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 65 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Yanan HeFrom the W. M. Keck Laboratory for Structural Biology, University of Maryland Institute for Bioscience and Biotechnology Research, Rockville, Maryland 20850, the Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742.
Yihong ChenFrom the W. M. Keck Laboratory for Structural Biology, University of Maryland Institute for Bioscience and Biotechnology Research, Rockville, Maryland 20850, the Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742.
Steven M Mooneythe Department of Urology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287.
Krithika Rajagopalanthe Department of Urology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287.
Ajay BhargavaShakti BioResearch, Woodbridge, Connecticut 06525, and.
Elizabeth Sachothe Department of Physics, North Carolina State University, Raleigh, North Carolina 27695.
Keith Weningerthe Department of Physics, North Carolina State University, Raleigh, North Carolina 27695.
Philip N BryanFrom the W. M. Keck Laboratory for Structural Biology, University of Maryland Institute for Bioscience and Biotechnology Research, Rockville, Maryland 20850.
Prakash Kulkarnithe Department of Urology, Johns Hopkins University School of Medicine, Baltimore, Maryland 21287, pkulkar4@ibbr.umd.edu.
John OrbanFrom the W. M. Keck Laboratory for Structural Biology, University of Maryland Institute for Bioscience and Biotechnology Research, Rockville, Maryland 20850, the Department of Chemistry and Biochemistry, University of Maryland, College Park, Maryland 20742, jorban@umd.edu.
Advanced Bioscience Laboratories (United States) · USJohns Hopkins Medicine · USNorth Carolina State University · USInstitute for Bioscience and Biotechnology ResearchJohns Hopkins University · US

Funding

Structure and stability of 3_alpha vs alpha_beta foldsR01GM062154 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI BRYAN, PHILIP N, ORBAN, JOHN · 2002 to 2016
$3.2M
PAGE4 as a Novel Target for Prostate Cancer PreventionR21CA181730 · NCI · UNIV OF MARYLAND, COLLEGE PARK · PI KULKARNI, PRAKASH, ORBAN, JOHN · 2014 to 2015
$364k
NCI NIH HHS CA181730NCI NIH HHS R21 CA181730NIGMS NIH HHS GM62154NIGMS NIH HHS R01 GM062154
6 · The paper itself

Abstract

Prostate-associated gene 4 (PAGE4) is an intrinsically disordered cancer/testis antigen that is up-regulated in the fetal and diseased human prostate. Knocking down PAGE4 expression results in cell death, whereas its overexpression leads to a growth advantage of prostate cancer cells (Zeng, Y., He, Y., Yang, F., Mooney, S. M., Getzenberg, R. H., Orban, J., and Kulkarni, P. (2011) The cancer/testis antigen prostate-associated gene 4 (PAGE4) is a highly intrinsically disordered protein. J. Biol. Chem. 286, 13985-13994). Phosphorylation of PAGE4 at Thr-51 is critical for potentiating c-Jun transactivation, an important factor in controlling cell growth, apoptosis, and stress response. Using NMR spectroscopy, we show that the PAGE4 polypeptide chain has local and long-range conformational preferences that are perturbed by site-specific phosphorylation at Thr-51. The population of transient turn-like structures increases upon phosphorylation in an ∼20-residue acidic region centered on Thr-51. This central region therefore becomes more compact and more negatively charged, with increasing intramolecular contacts to basic sequence motifs near the N and C termini. Although flexibility is decreased in the central region of phospho-PAGE4, the polypeptide chain remains highly dynamic overall. PAGE4 utilizes a transient helical structure adjacent to the central acidic region to bind c-Jun with low affinity in vitro. The binding interaction is attenuated by phosphorylation at Thr-51, most likely because of masking the effects of the more compact phosphorylated state. Therefore, phosphorylation of PAGE4 leads to conformational shifts in the dynamic ensemble, with large functional consequences. The changes in the structural ensemble induced by posttranslational modifications are similar conceptually to the conformational switching events seen in some marginally stable ("metamorphic") folded proteins in response to mutation or environmental triggers.

Indexed as

Amino Acid SequenceAntigens, NeoplasmCell Line, TumorHumansMaleModels, MolecularMolecular Sequence DataPhosphorylationProstatic NeoplasmsProtein ConformationAntigens, NeoplasmPAGE4 protein, humancancer/testis antigenconformational changeintrinsically disordered proteinNMRphosphorylationprostate-associated gene 4prostate cancer

Identifiers

PMID26242913
PMCPMC4599013
OpenAlexW1842624693

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.