Evidence map›Paper›PMID 26240361›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

SufB intein of Mycobacterium tuberculosis as a sensor for oxidative and nitrosative stresses.

Natalya I Topilina, Cathleen M Green, Pradeepa Jayachandran, Danielle S Kelley, Matthew J Stanger, Carol Lyn Piazza, Sasmita Nayak, Marlene Belfort

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Conditional protein splicing of thebioRxiv : the preprint server for biology · 2024
    Article
  8. Journal of fungi (Basel, Switzerland) · 2022
    Article
  9. Review
  10. Article
  11. Article
  12. Inteins as Drug Targets and Therapeutic Tools.Frontiers in molecular biosciences · 2022
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Gold Nanoparticles Augment N-Terminal Cleavage and Splicing Reactions inFrontiers in bioengineering and biotechnology · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Natalya I TopilinaDepartment of Biological Sciences and RNA Institute, University at Albany, Albany, NY 12222;
Cathleen M GreenDepartment of Biological Sciences and RNA Institute, University at Albany, Albany, NY 12222;
Pradeepa JayachandranDepartment of Biological Sciences and RNA Institute, University at Albany, Albany, NY 12222;
Danielle S KelleyDepartment of Biomedical Sciences, University at Albany, Albany, NY 12222;
Matthew J StangerDepartment of Biological Sciences and RNA Institute, University at Albany, Albany, NY 12222;
Carol Lyn PiazzaDepartment of Biological Sciences and RNA Institute, University at Albany, Albany, NY 12222;
Sasmita NayakSchool of Biotechnology and Kalinga Institute of Medical Sciences, Kalinga Institute of Industrial Technology University, Bhubaneswar, India 751024.
Marlene BelfortDepartment of Biological Sciences and RNA Institute, University at Albany, Albany, NY 12222; Department of Biomedical Sciences, University at Albany, Albany, NY 12222; mbelfort@albany.edu.
University at Albany, State University of New York · USKIIT University · IN

Funding

SELF-SPLICING INTEINS: FUNCTION, EVOLUTION, APPLICATIONR01GM044844 · NIGMS · WADSWORTH CENTER · PI BELFORT, MARLENE · 1990 to 2019
$8.9M
SELF-SPLICING INTRONS IN THE PHAGE T4/E COLI SYSTEMR01GM039422 · NIGMS · WADSWORTH CENTER · PI BELFORT, MARLENE · 1988 to 2019
$5.3M
INTRON DYNAMICS IN BACTERIAR37GM039422 · NIGMS · WADSWORTH CENTER · PI BELFORT, MARLENE · 2001 to 2010
$4.0M
Training in Biodefense and Emerging Infectious DiseaseT32AI055429 · NIAID · WADSWORTH CENTER · PI MCDONOUGH, KATHLEEN A · 2004 to 2014
$2.2M
NIAID NIH HHS T32 AI055429NIAID NIH HHS T32AI055429NIGMS NIH HHS GM39422NIGMS NIH HHS GM44844NIGMS NIH HHS R01 GM039422NIGMS NIH HHS R01 GM044844NIGMS NIH HHS R37 GM039422
6 · The paper itself

Abstract

Inteins are mobile genetic elements that self-splice at the protein level. Mycobacteria have inteins inserted into several important genes, including those corresponding to the iron-sulfur cluster assembly protein SufB. Curiously, the SufB inteins are found primarily in mycobacterial species that are potential human pathogens. Here we discovered an exceptional sensitivity of Mycobacterium tuberculosis SufB intein splicing to oxidative and nitrosative stresses when expressed in Escherichia coli. This effect results from predisposition of the intein's catalytic cysteine residues to oxidative and nitrosative modifications. Experiments with a fluorescent reporter system revealed that reactive oxygen species and reactive nitrogen species inhibit SufB extein ligation by forcing either precursor accumulation or N-terminal cleavage. We propose that splicing inhibition is an immediate, posttranslational regulatory response that can be either reversible, by inducing precursor accumulation, or irreversible, by inducing N-terminal cleavage, which may potentially channel mycobacteria into dormancy under extreme oxidative and nitrosative stresses.

Indexed as

InteinsProtein SplicingAmino Acid SequenceCarrier ProteinsCatalysisComputer SimulationCysteineEscherichia coliEscherichia coli ProteinsMass SpectrometryMolecular Sequence DataMycobacterium tuberculosisNitrogenOxidative StressOxygenPlasmidsCarrier ProteinsCysteineEscherichia coli ProteinsNitrogenOxygenSufB protein, E colicontrollable protein splicingcysteine chemistry[Fe-S] biogenesisintein functionposttranslational regulation

Identifiers

PMID26240361
PMCPMC4547236
OpenAlexW1877673302

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.