Evidence map›Paper›PMID 26240315›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2015

At14a-Like1 participates in membrane-associated mechanisms promoting growth during drought in Arabidopsis thaliana.

M Nagaraj Kumar, Yi-Fang Hsieh, Paul E Verslues

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
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  9. 2 in 1 Vectors Improve in Planta BiFC and FRET Analysis.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  10. Article
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  12. Review
  13. Review
  14. Expression Characterization ofInternational journal of molecular sciences · 2022
    Article
  15. Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

M Nagaraj KumarInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan 115.
Yi-Fang HsiehInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan 115.
Paul E VersluesInstitute of Plant and Microbial Biology, Academia Sinica, Taipei, Taiwan 115 paulv@gate.sinica.edu.tw.
Institute of Plant and Microbial Biology, Academia Sinica · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Limited knowledge of how plants regulate their growth and metabolism in response to drought and reduced soil water potential has impeded efforts to improve stress tolerance. Increased expression of the membrane-associated protein At14a-like1 (AFL1) led to increased growth and accumulation of the osmoprotective solute proline without negative effects on unstressed plants. Conversely, inducible RNA-interference suppression of AFL1 decreased growth and proline accumulation during low water potential while having no effect on unstressed plants. AFL1 overexpression lines had reduced expression of many stress-responsive genes, suggesting AFL1 may promote growth in part by suppression of negative regulatory genes. AFL1 interacted with the endomembrane proteins protein disulfide isomerase 5 (PDI5) and NAI2, with the PDI5 interaction being particularly increased by stress. PDI5 and NAI2 are negative regulatory factors, as pdi5, nai2, and pdi5-2nai2-3 mutants had increased growth and proline accumulation at low water potential. AFL1 also interacted with Adaptor protein2-2A (AP2-2A), which is part of a complex that recruits cargo proteins and promotes assembly of clathrin-coated vesicles. AFL1 colocalization with clathrin light chain along the plasma membrane, together with predictions of AFL1 structure, were consistent with a role in vesicle formation or trafficking. Fractionation experiments indicated that AFL1 is a peripheral membrane protein associated with both plasma membrane and endomembranes. These data identify classes of proteins (AFL1, PDI5, and NAI2) not previously known to be involved in drought signaling. AFL1-predicted structure, protein interactions, and localization all indicate its involvement in previously uncharacterized membrane-associated drought sensing or signaling mechanisms.

Indexed as

ArabidopsisArabidopsis ProteinsBacterial ProteinsCell MembraneDroughtsGene Expression Regulation, PlantLuminescent ProteinsMembrane PotentialsMembrane ProteinsOligonucleotide Array Sequence AnalysisPlant ProteinsPlants, Genetically ModifiedProlinePromoter Regions, GeneticProtein Disulfide-IsomerasesRNA InterferenceAFL1 protein, ArabidopsisArabidopsis ProteinsBacterial ProteinsLuminescent ProteinsMembrane ProteinsNAI2 protein, ArabidopsisPDI5 protein, ArabidopsisPlant ProteinsProlineProtein Disulfide-Isomerasesyellow fluorescent protein, BacteriaAt14aclathrin adaptor AP2-2adroughtprotein disulfide isomerasevesicle endocytosis

Identifiers

PMID26240315
PMCPMC4547278
OpenAlexW1807178664

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.