ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2015
Fine genetic mapping of the white immature fruit color gene w to a 33.0-kb region in cucumber (Cucumis sativus L.).
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
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Who cites it
27 citing papers in PubMed.
- Transposon-mediated structural haplotypes at CsMYB60 are associated with peel coloration in cucumber.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- The KNOX transcription factor ClSP activates ClAPRR2 to regulate dark green stripe formation in watermelon.Plant biotechnology journal · 2025Article
- Identification of Candidate Genes for Green Rind Color in Watermelon.Plants (Basel, Switzerland) · 2025Article
- Hybrid Prediction in Horticulture Crop Breeding: Progress and Challenges.Plants (Basel, Switzerland) · 2024Review
- Mapping and transcriptomic profiling reveal that the KNAT6 gene is involved in the dark green peel colour of mature pumpkin fruit (Cucurbita maxima L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Fine mapping and transcriptome profiling reveal CpAPRR2 to modulate immature fruit rind color formation in zucchini (Cucurbita pepo).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Mutation of CsARC6 affects fruit color and increases fruit nutrition in cucumber.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023Article
- ImprovingGenes · 2023Article
- Forward genetic studies revealFrontiers in plant science · 2023Article
- Genome-wide association analysis reveals a novel QTL CsPC1 for pericarp color in cucumber.BMC genomics · 2022Article
- QTL mapping identifies novel loci and putative candidate genes for rind traits in watermelon.3 Biotech · 2022Article
- Identification and characterization ofHorticulture research · 2022Article
- Molecular research progress and improvement approach of fruit quality traits in cucumber.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Review
- Development of SNP Markers for White Immature Fruit Skin Color in Cucumber (Plants (Basel, Switzerland) · 2021Article
- Genomic Prediction and the Practical Breeding of 12 Quantitative-Inherited Traits in Cucumber (Frontiers in plant science · 2021Article
- Identification of an Allelic Variant of theFrontiers in plant science · 2021Article
- Metabolome and transcriptome analyses reveal chlorophyll and anthocyanin metabolism pathway associated with cucumber fruit skin color.BMC plant biology · 2020Article
- Localization of quantitative trait loci for cucumber fruit shape by a population of chromosome segment substitution lines.Scientific reports · 2020Article
- Transcriptome-based analysis of carotenoid accumulation-related gene expression in petals of Chinese cabbage (3 Biotech · 2019Article
- Influence of Metarhizium anisopliae (IMI330189) and Mad1 protein on enzymatic activities and Toll-related genes of migratory locust.Environmental science and pollution research international · 2019Article
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Authors and funding
8 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
key messageThe white immature fruit color gene w was rapidly mapped to a 33.0-kb region to identify a valuable candidate gene that encodes peroxidase. The skin color of immature fruit is a crucial external trait of cucumbers, and white skin is shared by limited numbers of commercial cultivars. Herein, one BC1 population and two F2 segregating populations were constructed using four inbred parental lines (WD3 × B-2-2 and Q30 × Q24) to investigate the inheritance patterns and chromosomal locations of immature fruit color genes in cucumbers. Consequently, a single recessive gene, w, was identified that controls white immature fruit color. A total of 526 markers, which were derived from published genetic maps, two reference cucumber genomes ("9930" and GY14), and two parents (Q30 and Q24) for which whole-genome sequence information is available, were used to map the target gene w to a 33.0-kb region flanked by two SNP-based markers, ASPCR39262 and ASPCR39229, which are physically located at 39262450 and 39229482 of chromosome 3 ("9930" draft genome assembly), respectively. Gene prediction indicated that four potential genes were located in the target region. One gene that encodes peroxidase is likely to be a valuable candidate gene because quantitative real-time PCR revealed an eightfold difference in its transcriptional level, and several amino acid variations were found when the deduced amino acid sequence was aligned. A co-segregating marker was used synergistically to test its ability to predict the skin colors of 83 dark green/white germplasms, and the validity of its utility in marker-assisted selection was confirmed. Fine mapping of this locus will assist in cloning the gene and in marker-assisted breeding to develop dark green/white cucumber cultivars.
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