Evidence map›Paper›PMID 26237403›Full record

ArticlePLoS pathogens2015

Human Non-neutralizing HIV-1 Envelope Monoclonal Antibodies Limit the Number of Founder Viruses during SHIV Mucosal Infection in Rhesus Macaques.

Sampa Santra, Georgia D Tomaras, Ranjit Warrier, Nathan I Nicely, Hua-Xin Liao, Justin Pollara, Pinghuang Liu, S Munir Alam, Ruijun Zhang, Sarah L Cocklin and 36 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 132 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed, 2 pooled it
10.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 2 syntheses or guidelines pooled it, 162 citations in OpenAlex.

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72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

46 authors at 12 institutions in 4 countries.

Sampa SantraCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, United States of America.
Georgia D TomarasDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Ranjit WarrierDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Nathan I NicelyDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Hua-Xin LiaoDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Justin PollaraDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Pinghuang LiuDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
S Munir AlamDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Ruijun ZhangDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Sarah L CocklinCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, United States of America.
Xiaoying ShenDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Ryan DuffyDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Shi-Mao XiaDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Robert J SchutteDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Charles W Pemble IvDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
S Moses DennisonDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Hui LiDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Andrew ChaoDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Kora VidnovicDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Abbey EvansDepartment of Medicine, St Mary's Campus, Imperial College London, London, United Kingdom.
Katja KleinDepartment of Medicine, St Mary's Campus, Imperial College London, London, United Kingdom.
Amit KumarDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
James RobinsonDepartment of Pediatrics, Tulane University School of Medicine, New Orleans, Louisiana, United States of America.
Gary LanducciDivision of Infectious Diseases, Department of Medicine, University of California, Irvine, Irvine, California, United States of America.
Donald N ForthalDivision of Infectious Diseases, Department of Medicine, University of California, Irvine, Irvine, California, United States of America.
David C MontefioriDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Jaranit KaewkungwalTropical Hygiene, Mahidol University, Bangkok, Thailand.
Sorachai NitayaphanArmed Forces Research Institute of Medical Sciences (AFRIMS), Bangkok, Thailand.
Punnee PitisuttithumClinical Tropical Medicine, Mahidol University, Bangkok, Thailand.
Supachai Rerks-NgarmDepartment of Disease Control, Ministry of Public Health, Nonthaburi, Thailand.
Merlin L RobbUS Military Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.
Nelson L MichaelUS Military Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.
Jerome H KimUS Military Research Program, Walter Reed Army Institute of Research, Silver Spring, Maryland, United States of America.
Kelly A SoderbergDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Elena E GiorgiTheoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America.
Lily BlairTheoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America.
Bette T KorberTheoretical Division, Los Alamos National Laboratory, Los Alamos, New Mexico, United States of America.
Christiane MoogU1109, INSERM University of Strasbourg, Strasbourg, Alsace, France.
Robin J ShattockDepartment of Medicine, St Mary's Campus, Imperial College London, London, United Kingdom.
Norman L LetvinCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, United States of America.
Joern E SchmitzCenter for Virology and Vaccine Research, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, United States of America.
M A MoodyDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Feng GaoDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
Guido FerrariDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
George M ShawDepartment of Medicine, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.
Barton F HaynesDuke Human Vaccine Institute, Duke School of Medicine, Durham, North Carolina, United States of America.
University of Pennsylvania · USBeth Israel Deaconess Medical Center · USImperial College London · GBLos Alamos National Laboratory · USWalter Reed Army Institute of Research · USUniversity of California, Irvine · USArmed Forces Research Institute of Medical Science · THDepartment of Disease Control · THInserm · FRMahidol Oxford Tropical Medicine Research Unit · THMahidol University · THTulane University · US

Funding

Virus & Reservoirs CoreP30AI045008 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI DAVID S METZGER · 1999 to 2026
$78.6M
University of California Health Participation in the National COVID Cohort Collaborative (N3C)UL1TR001414 · NCATS · UNIVERSITY OF CALIFORNIA-IRVINE · PI COOPER, DAN M, VILAIN, ERIC J. · 2015 to 2023
$35.1M
Viral and Host Determinants of HIV-1 TransmissionU01AI067854 · NIAID · DUKE UNIVERSITY · PI DOLIN, RAPHAEL · 2005 to 2005
$14.9M
Penile transmission and neutralization of pathogenic SIVsmmR01AI094604 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SHAW, GEORGE M · 2011 to 2015
$3.6M
Cloning, characterization and in vivo testing of mucosally transmitted SIVR33AI087383 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI SHAW, GEORGE M · 2013 to 2015
$1.4M
Role of Fc Receptor Polymorphisms in Antibody-Mediated ProtectionR56AI097315 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI SCHMITZ, JOERN E. · 2012 to 2012
$874k
NCATS NIH HHS UL1 TR001414NIAID NIH HHS HHSN272201100023CNIAID NIH HHS P30 AI045008NIAID NIH HHS R01 AI094604NIAID NIH HHS R33 AI087383NIAID NIH HHS R56 AI097315NIAID NIH HHS U01 AI067854
6 · The paper itself

Abstract

HIV-1 mucosal transmission begins with virus or virus-infected cells moving through mucus across mucosal epithelium to infect CD4+ T cells. Although broadly neutralizing antibodies (bnAbs) are the type of HIV-1 antibodies that are most likely protective, they are not induced with current vaccine candidates. In contrast, antibodies that do not neutralize primary HIV-1 strains in the TZM-bl infection assay are readily induced by current vaccine candidates and have also been implicated as secondary correlates of decreased HIV-1 risk in the RV144 vaccine efficacy trial. Here, we have studied the capacity of anti-Env monoclonal antibodies (mAbs) against either the immunodominant region of gp41 (7B2 IgG1), the first constant region of gp120 (A32 IgG1), or the third variable loop (V3) of gp120 (CH22 IgG1) to modulate in vivo rectal mucosal transmission of a high-dose simian-human immunodeficiency virus (SHIV-BaL) in rhesus macaques. 7B2 IgG1 or A32 IgG1, each containing mutations to enhance Fc function, was administered passively to rhesus macaques but afforded no protection against productive clinical infection while the positive control antibody CH22 IgG1 prevented infection in 4 of 6 animals. Enumeration of transmitted/founder (T/F) viruses revealed that passive infusion of each of the three antibodies significantly reduced the number of T/F genomes. Thus, some antibodies that bind HIV-1 Env but fail to neutralize virus in traditional neutralization assays may limit the number of T/F viruses involved in transmission without leading to enhancement of viral infection. For one of these mAbs, gp41 mAb 7B2, we provide the first co-crystal structure in complex with a common cyclical loop motif demonstrated to be critical for infection by other retroviruses.

Indexed as

AnimalsAntibodies, MonoclonalAntibodies, ViralCD4-Positive T-LymphocytesFluorescent Antibody TechniqueHIV-1HumansIntestinal MucosaMacaca mulattaProtein ConformationRectumReverse Transcriptase Polymerase Chain ReactionSimian Acquired Immunodeficiency SyndromeSimian Immunodeficiency VirusSurface Plasmon ResonanceViral Envelope ProteinsAntibodies, MonoclonalAntibodies, ViralViral Envelope Proteins

Identifiers

PMID26237403
PMCPMC4523205
OpenAlexW1623081601

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.