Evidence map›Paper›PMID 26236294›Full record

ArticleFrontiers in microbiology2015

Highly diverse recombining populations of Vibrio cholerae and Vibrio parahaemolyticus in French Mediterranean coastal lagoons.

Kévin Esteves, Thomas Mosser, Fabien Aujoulat, Dominique Hervio-Heath, Patrick Monfort, Estelle Jumas-Bilak

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Spreading of PandemicFrontiers in cellular and infection microbiology · 2017
    Article
  11. Article
  12. Origins of the current seventh cholera pandemic.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  13. Article
  14. Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Kévin EstevesTeam "Pathogènes Hydriques Santé, Environnements", HydroSciences Montpellier, UMR 5569, Centre National de la Recherche, IRD, Université de Montpellier Montpellier, France.
Thomas MosserTeam "Pathogènes Hydriques Santé, Environnements", HydroSciences Montpellier, UMR 5569, Centre National de la Recherche, IRD, Université de Montpellier Montpellier, France.
Fabien AujoulatTeam "Pathogènes Hydriques Santé, Environnements", HydroSciences Montpellier, UMR 5569, Centre National de la Recherche, IRD, Université de Montpellier Montpellier, France.
Dominique Hervio-HeathIfremer, RBE, SG2M, Laboratoire Santé, Environnement et Microbiologie Plouzané, France.
Patrick MonfortTeam "Pathogènes Hydriques Santé, Environnements", HydroSciences Montpellier, UMR 5569, Centre National de la Recherche, IRD, Université de Montpellier Montpellier, France.
Estelle Jumas-BilakTeam "Pathogènes Hydriques Santé, Environnements", HydroSciences Montpellier, UMR 5569, Centre National de la Recherche, IRD, Université de Montpellier Montpellier, France ; Département d'Hygiène Hospitalière, Centre Hospitalier Universitaire Montpellier, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vibrio parahaemolyticus and Vibrio cholerae are ubiquitous to estuarine and marine environments. These two species found in Mediterranean coastal systems can induce infections in humans. Environmental isolates of V. cholerae (n = 109) and V. parahaemolyticus (n = 89) sampled at different dates, stations and water salinities were investigated for virulence genes and by a multilocus sequence-based analysis (MLSA). V. cholerae isolates were all ctxA negative and only one isolate of V. parahaemolyticus displayed trh2 gene. Most Sequence Types (ST) corresponded to unique ST isolated at one date or one station. Frequent recombination events were detected among different pathogenic species, V. parahaemolyticus, V. cholerae, Vibrio mimicus, and Vibrio metoecus. Recombination had a major impact on the diversification of lineages. The genetic diversity assessed by the number of ST/strain was higher in low salinity condition for V. parahaemolyticus and V. cholerae whereas the frequency of recombination events in V. cholerae was lower in low salinity condition. Mediterranean coastal lagoon systems housed V. cholerae and V. parahaemolyticus with genetic diversities equivalent to the worldwide diversity described so far. The presence of STs found in human infections as well as the frequency of recombination events in environmental vibrios populations could predict a potential epidemiological risk.

Indexed as

French coastal lagoonshuman pathogensmulti-locus sequence analysisphylogenyrecombinationVibriovirulence factor

Identifiers

PMID26236294
PMCPMC4503927

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.