Evidence map›Paper›PMID 26234586›Full record

ArticleProtein science : a publication of the Protein Society2015

Transient sampling of aggregation-prone conformations causes pathogenic instability of a parkinsonian mutant of DJ-1 at physiological temperature.

Nicole M Milkovic, Jonathan Catazaro, Jiusheng Lin, Steven Halouska, James L Kizziah, Sara Basiaga, Ronald L Cerny, Robert Powers, Mark A Wilson

Open access · bronzeAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Analytical biochemistry · 2018
    Article
  5. Regulation of Signal Transduction by DJ-1.Advances in experimental medicine and biology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Nicole M MilkovicDepartment of Biochemistry and the Redox Biology Center, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
Jonathan CatazaroDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
Jiusheng LinDepartment of Biochemistry and the Redox Biology Center, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
Steven HalouskaDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
James L KizziahDepartment of Biochemistry and the Redox Biology Center, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
Sara BasiagaDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
Ronald L CernyDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
Robert PowersDepartment of Chemistry, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
Mark A WilsonDepartment of Biochemistry and the Redox Biology Center, University of Nebraska-Lincoln, Lincoln, Nebraska, 68588.
University of Nebraska–Lincoln · USSpring Hill College · US

Funding

Redox Biology CenterP30GM103335 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI BECKER, DONALD F · 2012 to 2016
$4.3M
Redox Regulation of DJ-1 FunctionR01GM092999 · NIGMS · UNIVERSITY OF NEBRASKA LINCOLN · PI WILSON, MARK A. · 2010 to 2014
$1.3M
NIGMS NIH HHS P30 GM103335NIGMS NIH HHS P30GM103335NIGMS NIH HHS R01 GM092999NIGMS NIH HHS R01GM092999
6 · The paper itself

Abstract

Various missense mutations in the cytoprotective protein DJ-1 cause rare forms of inherited parkinsonism. One mutation, M26I, diminishes DJ-1 protein levels in the cell but does not result in large changes in the three-dimensional structure or thermal stability of the protein. Therefore, the molecular defect that results in loss of M26I DJ-1 protective function is unclear. Using NMR spectroscopy near physiological temperature, we found that the picosecond-nanosecond dynamics of wild-type and M26I DJ-1 are similar. In contrast, elevated amide hydrogen/deuterium exchange rates indicate that M26I DJ-1 is more flexible than the wild-type protein on longer timescales and that hydrophobic regions of M26I DJ-1 are transiently exposed to solvent. Tryptophan fluorescence spectroscopy and thiol crosslinking analyzed by mass spectrometry also demonstrate that M26I DJ-1 samples conformations that differ from the wild-type protein at 37°C. These transiently sampled conformations are unstable and cause M26I DJ-1 to aggregate in vitro at physiological temperature but not at lower temperatures. M26I DJ-1 aggregation is correlated with pathogenicity, as the structurally similar but non-pathogenic M26L mutation does not aggregate at 37°C. The onset of dynamically driven M26I DJ-1 instability at physiological temperature resolves conflicting literature reports about the behavior of this disease-associated mutant and illustrates the pitfalls of characterizing proteins exclusively at room temperature or below, as key aspects of their behavior may not be apparent.

Indexed as

TemperatureAmino Acid SequenceCircular DichroismHumansMagnetic Resonance SpectroscopyMolecular ConformationMutationParkinson DiseaseProtein Deglycase DJ-1PARK7 protein, humanProtein Deglycase DJ-1conformational dynamicsDJ-1PARK7Parkinson's diseaseprotein stabilitythiol crosslinking

Identifiers

PMID26234586
PMCPMC4594666
OpenAlexW1900899383

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.