Evidence map›Paper›PMID 26233224›Full record

ArticleMedical physics2015

External validation of a publicly available computer assisted diagnostic tool for mammographic mass lesions with two high prevalence research datasets.

Matthias Benndorf, Elizabeth S Burnside, Christoph Herda, Mathias Langer, Elmar Kotter

Abstract readValidation Study
In one paragraph

Article in Medical physics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Matthias BenndorfDepartment of Radiology, University Hospital Freiburg, Hugstetter Straße 55, Freiburg 79106, Germany.
Elizabeth S BurnsideDepartment of Radiology, University of Wisconsin-Madison School of Medicine and Public Health, 600 Highland Avenue, Madison, Wisconsin 53792.
Christoph HerdaKantonsspital Graubünden, Loesstraße 170, Chur 7000, Switzerland.
Mathias LangerDepartment of Radiology, University Hospital Freiburg, Hugstetter Straße 55, Freiburg 79106, Germany.
Elmar KotterDepartment of Radiology, University Hospital Freiburg, Hugstetter Straße 55, Freiburg 79106, Germany.

Funding

UW COMPREHENSIVE CANCER CENTER SUPPORTP30CA014520 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI Christian Capitini · 1985 to 2026
$142.6M
Institutional Clinical and Translational Science AwardUL1TR000427 · NCATS · UNIVERSITY OF WISCONSIN-MADISON · PI DREZNER, MARC KENNETH · 2012 to 2016
$32.2M
TrainingU54AI117924 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI CRAVEN, MARK W. · 2014 to 2018
$11.3M
Secure Sharing of Clinical History & Genetic Data: Empowering Predictive Pers. MeR01LM011028 · NLM · UNIVERSITY OF WISCONSIN-MADISON · PI PAGE, CHARLES DAVID · 2011 to 2014
$2.2M
Informatics Techniques to Optimize Mammography for Aging PopulationsR01CA165229 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BURNSIDE, ELIZABETH S · 2012 to 2016
$1.7M
Integrating Machine Learning and Physician Expertise for Breast Cancer DiagnosisR01LM010921 · NLM · UNIVERSITY OF WISCONSIN-MADISON · PI BURNSIDE, ELIZABETH S · 2011 to 2014
$1.2M
Mentoring And Research In Patient-Oriented Breast Cancer DiagnosisK24CA194251 · NCI · UNIVERSITY OF WISCONSIN-MADISON · PI BURNSIDE, ELIZABETH S · 2015 to 2019
$963k
NCATS NIH HHS UL1 TR000427NCI NIH HHS K24 CA194251NCI NIH HHS P30 CA014520NCI NIH HHS R01 CA165229NCI NIH HHS R01CA165229NIAID NIH HHS U54 AI117924NLM NIH HHS R01 LM010921NLM NIH HHS R01 LM011028NLM NIH HHS R01LM011028
6 · The paper itself

Abstract

purposeLesions detected at mammography are described with a highly standardized terminology: the breast imaging-reporting and data system (BI-RADS) lexicon. Up to now, no validated semantic computer assisted classification algorithm exists to interactively link combinations of morphological descriptors from the lexicon to a probabilistic risk estimate of malignancy. The authors therefore aim at the external validation of the mammographic mass diagnosis (MMassDx) algorithm. A classification algorithm like MMassDx must perform well in a variety of clinical circumstances and in datasets that were not used to generate the algorithm in order to ultimately become accepted in clinical routine.

methodsThe MMassDx algorithm uses a naïve Bayes network and calculates post-test probabilities of malignancy based on two distinct sets of variables, (a) BI-RADS descriptors and age ("descriptor model") and (b) BI-RADS descriptors, age, and BI-RADS assessment categories ("inclusive model"). The authors evaluate both the MMassDx (descriptor) and MMassDx (inclusive) models using two large publicly available datasets of mammographic mass lesions: the digital database for screening mammography (DDSM) dataset, which contains two subsets from the same examinations-a medio-lateral oblique (MLO) view and cranio-caudal (CC) view dataset-and the mammographic mass (MM) dataset. The DDSM contains 1220 mass lesions and the MM dataset contains 961 mass lesions. The authors evaluate discriminative performance using area under the receiver-operating-characteristic curve (AUC) and compare this to the BI-RADS assessment categories alone (i.e., the clinical performance) using the DeLong method. The authors also evaluate whether assigned probabilistic risk estimates reflect the lesions' true risk of malignancy using calibration curves.

resultsThe authors demonstrate that the MMassDx algorithms show good discriminatory performance. AUC for the MMassDx (descriptor) model in the DDSM data is 0.876/0.895 (MLO/CC view) and AUC for the MMassDx (inclusive) model in the DDSM data is 0.891/0.900 (MLO/CC view). AUC for the MMassDx (descriptor) model in the MM data is 0.862 and AUC for the MMassDx (inclusive) model in the MM data is 0.900. In all scenarios, MMassDx performs significantly better than clinical performance, P < 0.05 each. The authors furthermore demonstrate that the MMassDx algorithm systematically underestimates the risk of malignancy in the DDSM and MM datasets, especially when low probabilities of malignancy are assigned.

conclusionsThe authors' results reveal that the MMassDx algorithms have good discriminatory performance but less accurate calibration when tested on two independent validation datasets. Improvement in calibration and testing in a prospective clinical population will be important steps in the pursuit of translation of these algorithms to the clinic.

Indexed as

AlgorithmsAccess to InformationArea Under CurveBayes TheoremBreast NeoplasmsCalibrationDatabases, FactualDiagnosis, DifferentialHumansMammographyRadiographic Image Interpretation, Computer-AssistedROC Curve

Identifiers

PMID26233224
PMCPMC4570488

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