Evidence map›Paper›PMID 26231721›Full record

ArticleInfection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases2015

Time scale evolution of avipoxviruses.

Guillaume Le Loc'h, Stéphane Bertagnoli, Mariette F Ducatez

Abstract readComparative Study
In one paragraph

Article in Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Host-Calibrated Time Tree Caps the Age of Giant Viruses.Molecular biology and evolution · 2025
    Article
  5. Vertebrate-tropism of a cressdnavirus lineage implicated by poxvirus gene capture.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Guillaume Le Loc'hRENECO Wildlife Consultants LLC, Abu Dhabi, United Arab Emirates; Université de Toulouse, INP, ENVT, UMR1225, IHAP, F-31076 Toulouse, France; INRA, UMR1225, IHAP, F-31076 Toulouse, France. Electronic address: g.leloch@hotmail.fr.
Stéphane BertagnoliUniversité de Toulouse, INP, ENVT, UMR1225, IHAP, F-31076 Toulouse, France; INRA, UMR1225, IHAP, F-31076 Toulouse, France.
Mariette F DucatezINRA, UMR1225, IHAP, F-31076 Toulouse, France; Université de Toulouse, INP, ENVT, UMR1225, IHAP, F-31076 Toulouse, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Avipoxviruses are divided into three clades: canarypox-like viruses, fowlpox-like viruses, and psittacinepox-like viruses. Several molecular clock and demographic models available in the BEAST package were compared on three avipoxvirus genes (P4b, cnpv186 and DNA polymerase genes), which enabled to determine that avipoxviruses evolved at a rate of 2-8×10(-5)substitution/site/year, in the range of poxviruses previously reported evolution rates. In addition, the date of mean time of divergence of avipoxviruses from a common ancestor was extrapolated to be about 10,000-30,000years ago, at the same period as modern poxvirus species. Our findings will facilitate epidemiological investigations on avipoxviruses' spread, origin and circulation.

Indexed as

Amino Acid SubstitutionAvipoxvirusEvolution, MolecularMutation RatePhylogenyViral ProteinsViral ProteinsAvipoxvirusDNA virusEvolutionMolecular clock

Identifiers

PMID26231721
PMCPMC7106339

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.