Evidence map›Paper›PMID 26231645›Full record

ArticleApplied and environmental microbiology2015

Hansenula polymorpha Hac1p Is Critical to Protein N-Glycosylation Activity Modulation, as Revealed by Functional and Transcriptomic Analyses.

Hye-Yun Moon, Seon Ah Cheon, Hyunah Kim, M O Agaphonov, Ohsuk Kwon, Doo-Byoung Oh, Jeong-Yoon Kim, Hyun Ah Kang

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Review
  6. DoesMicroorganisms · 2021
    Article
  7. Article
  8. Engineering of Yeast Glycoprotein Expression.Advances in biochemical engineering/biotechnology · 2021
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Hye-Yun MoonDepartment of Life Science, College of Natural Science, Chung-Ang University, Seoul, Republic of Korea Department of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University, Daejeon, Republic of Korea.ORCID http://orcid.org/0000-0002-0988-8064
Seon Ah CheonDepartment of Life Science, College of Natural Science, Chung-Ang University, Seoul, Republic of Korea.
Hyunah KimDepartment of Life Science, College of Natural Science, Chung-Ang University, Seoul, Republic of Korea.
M O AgaphonovA. N. Bach Institute of Biochemistry of the Russian Academy of Sciences, Moscow, Russia.
Ohsuk KwonKorea Research Institute of Bioscience & Biotechnology (KRIBB), Daejeon, Republic of Korea.
Doo-Byoung OhKorea Research Institute of Bioscience & Biotechnology (KRIBB), Daejeon, Republic of Korea.
Jeong-Yoon KimDepartment of Microbiology and Molecular Biology, College of Bioscience and Biotechnology, Chungnam National University, Daejeon, Republic of Korea jykim@cnu.ac.kr hyunkang@cau.ac.kr.
Hyun Ah KangDepartment of Life Science, College of Natural Science, Chung-Ang University, Seoul, Republic of Korea jykim@cnu.ac.kr hyunkang@cau.ac.kr.
Chung-Ang University · KRChungnam National University · KRKorea Research Institute of Bioscience and Biotechnology · KRA N Bach Institute of Biochemistry · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Aggregation of misfolded protein in the endoplasmic reticulum (ER) induces a cellular protective response to ER stress, the unfolded protein response (UPR), which is mediated by a basic leucine zipper (bZIP) transcription factor, Hac1p/Xbp1. In this study, we identified and studied the molecular functions of a HAC1 homolog from the thermotolerant yeast Hansenula polymorpha (HpHAC1). We found that the HpHAC1 mRNA contains a nonconventional intron of 177 bp whose interaction with the 5' untranslated region is responsible for the translational inhibition of the HpHAC1 mRNA. The H. polymorpha hac1-null (Hphac1Δ) mutant strain grew slowly, even under normal growth conditions, and was less thermotolerant than the wild-type (WT) strain. The mutant strain was also more sensitive to cell wall-perturbing agents and to the UPR-inducing agents dithiothreitol (DTT) and tunicamycin (TM). Using comparative transcriptome analysis of the WT and Hphac1Δ strains treated with DTT and TM, we identified HpHAC1-dependent core UPR targets, which included genes involved in protein secretion and processing, particularly those required for N-linked protein glycosylation. Notably, different glycosylation and processing patterns of the vacuolar glycoprotein carboxypeptidase Y were observed in the WT and Hphac1Δ strains. Moreover, overexpression of active HpHac1p significantly increased the N-linked glycosylation efficiency and TM resistance. Collectively, our results suggest that the function of HpHac1p is important not only for UPR induction but also for efficient glycosylation in H. polymorpha.

Indexed as

Gene Expression Regulation, FungalBasic-Leucine Zipper Transcription FactorsGene DeletionGene Expression ProfilingGlycosylationIntronsMolecular Sequence DataPichiaProtein BiosynthesisRNA, MessengerSequence Analysis, DNAStress, PhysiologicalTemperatureBasic-Leucine Zipper Transcription FactorsRNA, Messenger

Identifiers

PMID26231645
PMCPMC4579441
OpenAlexW2329441247

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.