Evidence map›Paper›PMID 26231117›Full record

ArticleImmunity2015

Transcription Factor Bcl11b Controls Identity and Function of Mature Type 2 Innate Lymphoid Cells.

Danielle Califano, Jonathan J Cho, Mohammad N Uddin, Kyle J Lorentsen, Qi Yang, Avinash Bhandoola, Hongmin Li, Dorina Avram

Open access · bronzeAbstract read
In one paragraph

Article in Immunity, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 107 papers.

0numbers the graph read from it
0cells of the map it votes in
107citing papers in PubMed
8.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

107 citing papers in PubMed, 177 citations in OpenAlex.

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47 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 1 country.

Danielle CalifanoCenter for Immunology and Microbial Disease, Albany Medical Center, 47 New Scotland Avenue, MC-165, Albany, NY 12208, USA.
Jonathan J ChoCenter for Immunology and Microbial Disease, Albany Medical Center, 47 New Scotland Avenue, MC-165, Albany, NY 12208, USA; Department of Medicine, College of Medicine, University of Florida, 1600 Southwest Archer Road, MSB, Gainesville, FL 32610-0225, USA.
Mohammad N UddinCenter for Immunology and Microbial Disease, Albany Medical Center, 47 New Scotland Avenue, MC-165, Albany, NY 12208, USA; Department of Medicine, College of Medicine, University of Florida, 1600 Southwest Archer Road, MSB, Gainesville, FL 32610-0225, USA.
Kyle J LorentsenCenter for Immunology and Microbial Disease, Albany Medical Center, 47 New Scotland Avenue, MC-165, Albany, NY 12208, USA; Department of Medicine, College of Medicine, University of Florida, 1600 Southwest Archer Road, MSB, Gainesville, FL 32610-0225, USA.
Qi YangDepartment of Pathology and Laboratory Medicine, School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.
Avinash BhandoolaT-Cell Biology and Development Section, Laboratory of Genome Integrity, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD 20892, USA.
Hongmin LiWadsworth Center, New York State Department of Health, Albany, NY 12208, USA.
Dorina AvramCenter for Immunology and Microbial Disease, Albany Medical Center, 47 New Scotland Avenue, MC-165, Albany, NY 12208, USA; Department of Medicine, College of Medicine, University of Florida, 1600 Southwest Archer Road, MSB, Gainesville, FL 32610-0225, USA. Electronic address: dorina.avram@medicine.ufl.edu.
University of Florida · USAlbany Medical Center Hospital · USCenter for Cancer Research · USNew York State Department of Health · USUniversity of Pennsylvania · US

Funding

T cell Development and RegenerationZIABC011633 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI BHANDOOLA, AVINASH · 2015 to 2025
$20.5M
Role of Bcl11b in CD4+ T cells and innate lymphoid cellsR01AI067846 · NIAID · UNIVERSITY OF FLORIDA · PI AVRAM, DORINA · 2007 to 2023
$6.2M
Transcriptional control in innate lymphoid type II cellsR21AI112492 · NIAID · UNIVERSITY OF FLORIDA · PI AVRAM, DORINA · 2014 to 2015
$423k
Transcriptional control of genes implicated in suppression function of Treg cellsR21AI131205 · NIAID · UNIVERSITY OF FLORIDA · PI AVRAM, DORINA · 2017 to 2018
$419k
NIAID NIH HHS R01 AI067846NIAID NIH HHS R01AI067846NIAID NIH HHS R21 AI112492NIAID NIH HHS R21AI112492
6 · The paper itself

Abstract

Type 2 innate lymphoid cells (ILC2s) promote anti-helminth responses and contribute to allergies. Here, we report that Bcl11b, previously considered a T-cell-specific transcription factor, acted directly upstream of the key ILC2 transcription factor Gfi1 to maintain its expression in mature ILC2s. Consequently, Bcl11b(-/-) ILC2s downregulated Gata3 and downstream genes, including Il1rl1 (encoding IL-33 receptor), and upregulated Rorc and type 3 ILC (ILC3) genes. Additionally, independent of Gfi1, Bcl11b directly repressed expression of the gene encoding the ILC3 transcription factor Ahr, further contributing to silencing of ILC3 genes in ILC2s. Thus, Bcl11b(-/-) ILC2s lost their functions and gained ILC3 functions, and although they expanded in response to the protease allergen papain, they produced ILC3 but not ILC2 cytokines and caused increased airway infiltration of neutrophils instead of eosinophils. Our results demonstrate that Bcl11b is more than just a T-cell-only transcription factor and establish that Bcl11b sustains mature ILC2 genetic and functional programs and lineage fidelity.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsCell DifferentiationCell LineageCell MovementCells, CulturedCitrobacter rodentiumDNA-Binding ProteinsEnterobacteriaceae InfectionsEosinophilsGATA3 Transcription FactorGene Expression RegulationImmunity, InnateInterleukin-1 Receptor-Like 1 ProteinLymphocytesLymphocyte SubsetsAhr protein, mouseBasic Helix-Loop-Helix ProteinsBcl11b protein, mouseDNA-Binding ProteinsGata3 protein, mouseGATA3 Transcription FactorGfi1 protein, mouseIl1rl1 protein, mouseInterleukin-1 Receptor-Like 1 ProteinNuclear Receptor Subfamily 1, Group F, Member 3Receptors, Aryl HydrocarbonReceptors, InterleukinRepressor ProteinsRorc protein, mouseTranscription FactorsTumor Suppressor Proteins

Identifiers

PMID26231117
PMCPMC4657441
OpenAlexW1707175384

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.