Evidence map›Paper›PMID 26230508›Full record

ArticlePloS one2015

Host Jumps and Radiation, Not Co-Divergence Drives Diversification of Obligate Pathogens. A Case Study in Downy Mildews and Asteraceae.

Young-Joon Choi, Marco Thines

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
17.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 74 citations in OpenAlex.

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  8. Mycobiology · 2020
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  11. Characterization ofMycobiology · 2019
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  13. A revision ofIMA fungus · 2018
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  15. IMA fungus · 2018
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  18. The first smut fungus,MycoKeys · 2018
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  19. Mycobiology · 2018
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  20. Taxonomy and Phylogeny ofMycobiology · 2017
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Young-Joon ChoiFaculty of Biosciences, Institute of Ecology, Evolution and Diversity, Goethe University Frankfurt am Main, D-60438, Frankfurt am Main, Germany; Biodiversity and Climate Research Centre (BiK-F), D-60325, Frankfurt am Main, Germany.
Marco ThinesFaculty of Biosciences, Institute of Ecology, Evolution and Diversity, Goethe University Frankfurt am Main, D-60438, Frankfurt am Main, Germany; Biodiversity and Climate Research Centre (BiK-F), D-60325, Frankfurt am Main, Germany; Integrative Fungal Research Cluster (IPF), D-60325, Frankfurt am Main, Germany; Senckenberg Gesellschaft für Naturforschung, D-60325, Frankfurt am Main, Germany.
Goethe University Frankfurt · DESenckenberg Biodiversity and Climate Research Centre · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Even though the microevolution of plant hosts and pathogens has been intensely studied, knowledge regarding macro-evolutionary patterns is limited. Having the highest species diversity and host-specificity among Oomycetes, downy mildews are a useful a model for investigating long-term host-pathogen coevolution. We show that phylogenies of Bremia and Asteraceae are significantly congruent. The accepted hypothesis is that pathogens have diverged contemporarily with their hosts. But maximum clade age estimation and sequence divergence comparison reveal that congruence is not due to long-term coevolution but rather due to host-shift driven speciation (pseudo-cospeciation). This pattern results from parasite radiation in related hosts, long after radiation and speciation of the hosts. As large host shifts free pathogens from hosts with effector triggered immunity subsequent radiation and diversification in related hosts with similar innate immunity may follow, resulting in a pattern mimicking true co-divergence, which is probably limited to the terminal nodes in many pathogen groups.

Indexed as

AsteraceaeEvolution, MolecularGenetic SpeciationHost-Parasite InteractionsOomycetesPeronosporaPhylogenyRadiation

Identifiers

PMID26230508
PMCPMC4521919
OpenAlexW1640834147

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.