Evidence map›Paper›PMID 26230253›Full record

ArticlePLoS genetics2015

A Genetic Incompatibility Accelerates Adaptation in Yeast.

Duyen T Bui, Elliot Dine, James B Anderson, Charles F Aquadro, Eric E Alani

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 1 synthesis or guideline pooled it, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Duyen T BuiDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Elliot DineDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
James B AndersonDepartment of Biology, University of Toronto, Mississauga, Ontario, Canada.
Charles F AquadroDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Eric E AlaniDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, United States of America.
Cornell University · USUniversity of Toronto · CA

Funding

Roles for Mismatch Repair Proteins in Maintaining Genome StabilityR01GM053085 · NIGMS · CORNELL UNIVERSITY ITHACA · PI ALANI, ERIC E. · 1995 to 2019
$7.3M
Adaptive Protein Evolution of the Drosophila Germline Stem Cell Gene Bag of MarblesR01GM095793 · NIGMS · CORNELL UNIVERSITY · PI AQUADRO, CHARLES F · 2011 to 2024
$3.9M
NIGMS NIH HHS GM095793NIGMS NIH HHS GM53085NIGMS NIH HHS R01 GM053085NIGMS NIH HHS R01 GM095793
6 · The paper itself

Abstract

During mismatch repair (MMR) MSH proteins bind to mismatches that form as the result of DNA replication errors and recruit MLH factors such as Mlh1-Pms1 to initiate excision and repair steps. Previously, we identified a negative epistatic interaction involving naturally occurring polymorphisms in the MLH1 and PMS1 genes of baker's yeast. Here we hypothesize that a mutagenic state resulting from this negative epistatic interaction increases the likelihood of obtaining beneficial mutations that can promote adaptation to stress conditions. We tested this by stressing yeast strains bearing mutagenic (incompatible) and non-mutagenic (compatible) mismatch repair genotypes. Our data show that incompatible populations adapted more rapidly and without an apparent fitness cost to high salt stress. The fitness advantage of incompatible populations was rapid but disappeared over time. The fitness gains in both compatible and incompatible strains were due primarily to mutations in PMR1 that appeared earlier in incompatible evolving populations. These data demonstrate a rapid and reversible role (by mating) for genetic incompatibilities in accelerating adaptation in eukaryotes. They also provide an approach to link experimental studies to observational population genomics.

Indexed as

Adaptor Proteins, Signal TransducingCalcium-Transporting ATPasesCarrier ProteinsDNA Mismatch RepairDNA ReplicationMolecular ChaperonesMutL Protein Homolog 1MutL ProteinsOsmotic PressureSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSalt ToleranceSodium ChlorideAdaptor Proteins, Signal TransducingCalcium-Transporting ATPasesCarrier ProteinsMLH1 protein, S cerevisiaeMolecular ChaperonesMutL Protein Homolog 1MutL ProteinsPMS1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsSodium ChlorideSSC1 protein, S cerevisiae

Identifiers

PMID26230253
PMCPMC4521705
OpenAlexW1870604526

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.