Evidence map›Paper›PMID 26224840›Full record

ArticleJournal of clinical microbiology2015

Allocation of Klebsiella pneumoniae Bloodstream Isolates into Four Distinct Groups by ompK36 Typing in a Taiwanese University Hospital.

Jing-Jou Yan, Po-Xing Zheng, Ming-Cheng Wang, Shu-Huei Tsai, Li-Rong Wang, Jiunn-Jong Wu

Open access · greenAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.0field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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  8. Metastatic infection caused by hypervirulentWorld journal of clinical cases · 2019
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  9. Article
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  11. Microbiological and Clinical Characteristics of HypermucoviscousFrontiers in cellular and infection microbiology · 2017
    Article
  12. Article
  13. Outbreak by HypermucoviscousFrontiers in cellular and infection microbiology · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jing-Jou YanDepartment of Pathology, College of Medicine, National Cheng Kung University, Tainan, Taiwan Department of Pathology, National Cheng Kung University Hospital, Tainan, Taiwan jingjou@mail.ncku.edu.tw.
Po-Xing ZhengInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
Ming-Cheng WangDepartment of Internal Medicine, College of Medicine, National Cheng Kung University, Tainan, Taiwan Department of Internal Medicine, National Cheng Kung University Hospital, Tainan, Taiwan.
Shu-Huei TsaiDepartment of Pathology, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
Li-Rong WangDepartment of Pathology, National Cheng Kung University Hospital, Tainan, Taiwan Center for Infection Control, National Cheng Kung University Hospital, Tainan, Taiwan.
Jiunn-Jong WuMedical Laboratory Science and Biotechnology, College of Medicine, National Cheng Kung University, Tainan, Taiwan.
National Cheng Kung University · TWNational Cheng Kung University Hospital · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The OmpK36 porin plays a role in carbapenem resistance and may contribute to bacterial virulence in Klebsiella pneumoniae. This study aimed to investigate the characteristics of different groups of K. pneumoniae separated by ompK36 typing. Among 226 nonduplicate K. pneumoniae bloodstream isolates collected at a Taiwanese hospital in 2011, four ompK36 types, designated types A, B, C, and D, were identified by PCR in 61, 28, 100, and 36 isolates, respectively; 1 isolate was untypeable. Statistical analysis showed significantly higher rates of antimicrobial resistance (all tested antibiotics except meropenem), extended-spectrum β-lactamases or DHA-1 (47.5% together), Qnr-type quinolone resistance determinants (50.8%), and IncFIIA-type plasmids (49.2%) in group A than in others. Seventeen isolates were identified as belonging to 3 international high-risk clones (4 sequence type 11 [ST11], 10 ST15, and 3 ST147 isolates); all isolates but 1 ST15 isolate were classified in group A. The significant characteristics of group C were hypermucoviscosity (62.0%) and a higher virulence gene content. This group included all serotype K1 (n = 30), K2 (n = 25), and K5 (n = 3) isolates, 6 of 7 K57 isolates, all isolates of major clones associated with pyogenic liver abscesses (29 ST23, 11 ST65, 5 ST86, 7 ST373, and 1 ST375 isolates), and 16 (94.1%) of 17 isolates causing bacteremic liver abscesses. Twelve (42.9%) of the group B isolates were responsible for bacteremic biliary tract infections. Group D was predominant (83.3%) among 12 K20 isolates. This study suggests that most clinical K. pneumoniae isolates can be allocated into four groups with distinct characteristics based on ompK36 types.

Indexed as

Molecular TypingBacteremiaBacterial ProteinsCluster AnalysisCross InfectionDrug Resistance, BacterialGenes, BacterialGenotypeHospitals, UniversityHumansKlebsiella InfectionsKlebsiella pneumoniaeMolecular EpidemiologyPlasmidsPolymerase Chain ReactionPorinsBacterial ProteinsOmpK36 protein, Klebsiella pneumoniaePorins

Identifiers

PMID26224840
PMCPMC4572542
OpenAlexW999866833

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.