Evidence map›Paper›PMID 26224782›Full record

ArticleG3 (Bethesda, Md.)2015

High-Density Genotypes of Inbred Mouse Strains: Improved Power and Precision of Association Mapping.

Christoph D Rau, Brian Parks, Yibin Wang, Eleazar Eskin, Petr Simecek, Gary A Churchill, Aldons J Lusis

Abstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. The mouse resource at National Resource Center for Mutant Mice of China.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Genetic determinants of ammonia-induced acute lung injury in mice.American journal of physiology. Lung cellular and molecular physiology · 2021
    Article
  15. Article
  16. The Genetics of Variation of the Wave 1 Amplitude of the Mouse Auditory Brainstem Response.Journal of the Association for Research in Otolaryngology : JARO · 2020
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Christoph D RauDepartments of Human Genetics, Medicine, Microbiology, Immunology and Molecular Genetics, UCLA, Los Angeles, California 90095-1679.
Brian ParksDepartments of Human Genetics, Medicine, Microbiology, Immunology and Molecular Genetics, UCLA, Los Angeles, California 90095-1679.
Yibin WangDepartment of Anesthesiology, UCLA, Los Angeles, California 90095-1679.
Eleazar EskinDepartment of Computer Sciences, UCLA, Los Angeles, California 90095-1679.
Petr SimecekThe Jackson Laboratory, Bar Harbor, Maine 04609.
Gary A ChurchillThe Jackson Laboratory, Bar Harbor, Maine 04609.
Aldons J LusisDepartments of Human Genetics, Medicine, Microbiology, Immunology and Molecular Genetics, UCLA, Los Angeles, California 90095-1679 jlusis@mednet.ucla.edu.

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
ULTRASTRUCTURE OF THE INTIMA IN EARLY LESION FORMATIONP01HL030568 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI FOGELMAN, ALAN M · 1985 to 2019
$55.2M
Systems genomics of metabolic syndrome traitsP01HL028481 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE · 1985 to 2019
$50.2M
UNC and PERLEGEN, IncP50GM076468 · NIGMS · JACKSON LABORATORY · PI CHESLER, ELISSA J · 2006 to 2015
$31.0M
A Systems Approach to Dissect Genetic Basis of Heart FailureR01HL123295 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE, WANG, YIBIN · 2014 to 2017
$2.6M
Systems Genetics Analysis of Gene-by-Environment Interactions in ObesityR00HL123021 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI PARKS, BRIAN WESLEY · 2016 to 2018
$747k
Systems Genetics Approach to AtherosclerosisR01HL126753 · NHLBI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LUSIS, ALDONS JAKE · 2015 to 2015
$209k
NCI NIH HHS P30 CA034196NHLBI NIH HHS HL123295NHLBI NIH HHS HL126753NHLBI NIH HHS HL28481NHLBI NIH HHS HL30568NHLBI NIH HHS P01 HL028481NHLBI NIH HHS P01 HL030568NHLBI NIH HHS R00 HL123021NHLBI NIH HHS R01 HL123295NHLBI NIH HHS R01 HL126753NIGMS NIH HHS GM076468NIGMS NIH HHS P50 GM076468PHS HHS D094311
6 · The paper itself

Abstract

Human genome-wide association studies have identified thousands of loci associated with disease phenotypes. Genome-wide association studies also have become feasible using rodent models and these have some important advantages over human studies, including controlled environment, access to tissues for molecular profiling, reproducible genotypes, and a wide array of techniques for experimental validation. Association mapping with common mouse inbred strains generally requires 100 or more strains to achieve sufficient power and mapping resolution; in contrast, sample sizes for human studies typically are one or more orders of magnitude greater than this. To enable well-powered studies in mice, we have generated high-density genotypes for ∼175 inbred strains of mice using the Mouse Diversity Array. These new data increase marker density by 1.9-fold, have reduced missing data rates, and provide more accurate identification of heterozygous regions compared with previous genotype data. We report the discovery of new loci from previously reported association mapping studies using the new genotype data. The data are freely available for download, and Web-based tools provide easy access for association mapping and viewing of the underlying intensity data for individual loci.

Indexed as

Chromosome MappingGenotypeAllelesAnimalsGene FrequencyGenetic VariationGenome-Wide Association StudyGenotyping TechniquesMiceMice, Inbred StrainsPhenotypePolymorphism, Single NucleotidegenotypingHMDPmousemouse diversity array

Identifiers

PMID26224782
PMCPMC4592984

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.