Evidence map›Paper›PMID 26224708›Full record

ArticleProceedings. Biological sciences2015

Costs of CRISPR-Cas-mediated resistance in Streptococcus thermophilus.

Pedro F Vale, Guillaume Lafforgue, Francois Gatchitch, Rozenn Gardan, Sylvain Moineau, Sylvain Gandon

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings. Biological sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 75 papers.

0numbers the graph read from it
0cells of the map it votes in
75citing papers in PubMed
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

75 citing papers in PubMed, 141 citations in OpenAlex.

  1. Review
  2. Molecular kinetics dictate population dynamics in CRISPR-based plasmid defense.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Phages and quorum sensing: findings to consider in phage therapy.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Review
  4. Article
  5. Review
  6. Article
  7. Engineering broad-spectrum phage-resistantApplied and environmental microbiology · 2025
    Article
  8. Article
  9. Phage provoke growth delays and SOS response induction despite CRISPR-Cas protection.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Bacterial defense and phage counterdefense lead to coexistence in a modeled ecosystem.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  19. Article
  20. Article

15 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

Pedro F ValeCentre for Immunity, Infection, and Evolution, Institute of Evolutionary Biology, School of Biological Sciences, University of Edinburgh, Ashworth Laboratories, West Mains Road, Edinburgh EH9 3JT, UK.
Guillaume LafforgueCEFE UMR 5175, CNRS-Université de Montpellier, Université Paul-Valéry Montpellier, EPHE, 1919, route de Mende 34293 Montpellier Cedex 5, France.
Francois GatchitchCEFE UMR 5175, CNRS-Université de Montpellier, Université Paul-Valéry Montpellier, EPHE, 1919, route de Mende 34293 Montpellier Cedex 5, France.
Rozenn GardanINRA, UMR1319 MICALIS, Jouy-en-Josas, France.
Sylvain MoineauGREB and Félix d'Hérelle Reference Center for Bacterial Viruses, Faculté de médecine dentaire, Québec, Canada G1V 0A6 Département de biochimie, de microbiologie et de bio-informatique and PROTEO, Faculté des sciences et de génie, Université Laval, Québec, Canada G1V 0A6.
Sylvain GandonCEFE UMR 5175, CNRS-Université de Montpellier, Université Paul-Valéry Montpellier, EPHE, 1919, route de Mende 34293 Montpellier Cedex 5, France sylvain.gandon@cefe.cnrs.fr.
Centre d'Écologie Fonctionnelle et Évolutive · FRCentre for Immunity, Infection and Evolution · GBMicrobiologie de l’alimentation au service de la santé · FRUniversité Laval · CA

Funding

European Research Council 243054Wellcome Trust 095831
6 · The paper itself

Abstract

CRISPR-Cas is a form of adaptive sequence-specific immunity in microbes. This system offers unique opportunities for the study of coevolution between bacteria and their viral pathogens, bacteriophages. A full understanding of the coevolutionary dynamics of CRISPR-Cas requires knowing the magnitude of the cost of resisting infection. Here, using the gram-positive bacterium Streptococcus thermophilus and its associated virulent phage 2972, a well-established model system harbouring at least two type II functional CRISPR-Cas systems, we obtained different fitness measures based on growth assays in isolation or in pairwise competition. We measured the fitness cost associated with different components of this adaptive immune system: the cost of Cas protein expression, the constitutive cost of increasing immune memory through additional spacers, and the conditional costs of immunity during phage exposure. We found that Cas protein expression is particularly costly, as Cas-deficient mutants achieved higher competitive abilities than the wild-type strain with functional Cas proteins. Increasing immune memory by acquiring up to four phage-derived spacers was not associated with fitness costs. In addition, the activation of the CRISPR-Cas system during phage exposure induces significant but small fitness costs. Together these results suggest that the costs of the CRISPR-Cas system arise mainly due to the maintenance of the defence system. We discuss the implications of these results for the evolution of CRISPR-Cas-mediated immunity.

Indexed as

Adaptive ImmunityCRISPR-Cas SystemsBacteriophagesEvolution, MolecularGenetic FitnessImmunologic MemoryStreptococcus thermophilusCRISPRfitness costsimmunity

Identifiers

PMID26224708
PMCPMC4528535
OpenAlexW1823719955

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.