Evidence map›Paper›PMID 26221765›Full record

ArticleVirus research2015

Full-length genome analysis of canine coronavirus type I.

Nicola Decaro, Viviana Mari, Gabriella Elia, Gianvito Lanave, Giulia Dowgier, Maria Loredana Colaianni, Vito Martella, Canio Buonavoglia

Open access · greenAbstract read
In one paragraph

Article in Virus research, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 30 citations in OpenAlex.

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  12. Molecular diversity ofHeliyon · 2020
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Nicola DecaroDepartment of Veterinary Medicine, University of Bari, Valenzano, Italy. Electronic address: nicola.decaro@uniba.it.
Viviana MariDepartment of Veterinary Medicine, University of Bari, Valenzano, Italy.
Gabriella EliaDepartment of Veterinary Medicine, University of Bari, Valenzano, Italy.
Gianvito LanaveDepartment of Veterinary Medicine, University of Bari, Valenzano, Italy.
Giulia DowgierDepartment of Veterinary Medicine, University of Bari, Valenzano, Italy.
Maria Loredana ColaianniDepartment of Veterinary Medicine, University of Bari, Valenzano, Italy.
Vito MartellaDepartment of Veterinary Medicine, University of Bari, Valenzano, Italy.
Canio BuonavogliaDepartment of Veterinary Medicine, University of Bari, Valenzano, Italy.
University of Bari Aldo Moro · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Canine coronavirus types I (CCoV-I) and II (CCoV-II) are usually responsible for mild enteritis in dogs. While the CCoV-II genome has been completely sequenced, to date there are no complete genomic sequence data available publicly for CCoV-I. Thus, the aim of the present study was to analyze the full-length genome of a CCoV-I prototype strain that had been recovered from a dog with diarrhea in Italy. CCoV-I strain 23/03 has a genome of 30,000 nucleotides, excluding the 3' poly(A) tail, displaying the typical Alphacoronavirus-1 organization and the highest genetic relatedness to CCoV-II. However, two distinct features were observed in the CCoV-I genome: (i) the presence of an additional ORF between the spike (S) protein gene and ORF3a; (ii) the diversity of the S protein, which is more closely related to that of feline coronavirus type I and presents a furin cleavage site. The present study may contribute to a better understanding of the Alphacoronavirus-1 evolutionary pattern and may be paradigmatic of how coronaviruses evolve through gene losses, acquisition and exchanges among different members.

Indexed as

Genome, ViralSequence Analysis, DNAAnimalsCluster AnalysisCoronavirus, CanineDiarrheaDog DiseasesDogsGene OrderGenes, ViralItalyMolecular Sequence DataPhylogenyRNA, ViralRNA VirusesSequence HomologyRNA, ViralCanine coronavirus type IDogGenomic analysis

Identifiers

PMID26221765
PMCPMC7114546
OpenAlexW1417865514

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.