Evidence map›Paper›PMID 26221417›Full record

ArticleStandards in genomic sciences2015

High-quality permanent draft genome sequence of Rhizobium leguminosarum bv. viciae strain GB30; an effective microsymbiont of Pisum sativum growing in Poland.

Andrzej Mazur, Sofie E De Meyer, Rui Tian, Jerzy Wielbo, Kamil Zebracki, Rekha Seshadri, Tbk Reddy, Victor Markowitz, Natalia N Ivanova, Amrita Pati and 3 more

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PubMed Full text at PMC Publisher
In one paragraph

Article in Standards in genomic sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.6field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 5 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 4 countries.

Andrzej MazurDepartment of Genetics and Microbiology, Maria Curie Sklodowska University, Lublin, Poland.
Sofie E De MeyerCentre for Rhizobium Studies, Murdoch University, Murdoch, Western Australia.
Rui TianCentre for Rhizobium Studies, Murdoch University, Murdoch, Western Australia.
Jerzy WielboDepartment of Genetics and Microbiology, Maria Curie Sklodowska University, Lublin, Poland.
Kamil ZebrackiDepartment of Genetics and Microbiology, Maria Curie Sklodowska University, Lublin, Poland.
Rekha SeshadriDOE Joint Genome Institute, Walnut Creek, California USA.
Tbk ReddyDOE Joint Genome Institute, Walnut Creek, California USA.
Victor MarkowitzBiological Data Management and Technology Center, Lawrence Berkeley National Laboratory, Berkeley, California USA.
Natalia N IvanovaDOE Joint Genome Institute, Walnut Creek, California USA.
Amrita PatiDOE Joint Genome Institute, Walnut Creek, California USA.
Tanja WoykeDOE Joint Genome Institute, Walnut Creek, California USA.
Nikos C KyrpidesDOE Joint Genome Institute, Walnut Creek, California USA ; Department of Biological Sciences, King Abdulaziz University, Jeddah, Saudi Arabia.
Wayne ReeveCentre for Rhizobium Studies, Murdoch University, Murdoch, Western Australia.
Joint Genome Institute · USMaria Curie-Skłodowska University · PLMurdoch University · AUKing Abdulaziz University · SALawrence Berkeley National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rhizobium leguminosarum bv. viciae GB30 is an aerobic, motile, Gram-negative, non-spore-forming rod that can exist as a soil saprophyte or as a legume microsymbiont of Pisum sativum. GB30 was isolated in Poland from a nodule recovered from the roots of Pisum sativum growing at Janow. GB30 is also an effective microsymbiont of the annual forage legumes vetch and pea. Here we describe the features of R. leguminosarum bv. viciae strain GB30, together with sequence and annotation. The 7,468,464 bp high-quality permanent draft genome is arranged in 78 scaffolds of 78 contigs containing 7,227 protein-coding genes and 75 RNA-only encoding genes, and is part of the GEBA-RNB project proposal.

Indexed as

AlphaproteobacteriaGEBA-RNBNitrogen fixationRhizobiaRoot-nodule bacteria

Identifiers

PMID26221417
PMCPMC4517663
OpenAlexW1595425519

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.