Evidence map›Paper›PMID 26219682›Full record

ArticleEuropean journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology2015

Direct identification of major Gram-negative pathogens in respiratory specimens by respiFISH® HAP Gram (-) Panel, a beacon-based FISH methodology.

R Koncan, M Parisato, C Sakarikou, G Stringari, C Fontana, V Favuzzi, M Ligozzi, G Lo Cascio

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Ventilator-Associated Pneumonia: The Role of Emerging Diagnostic Technologies.Seminars in respiratory and critical care medicine · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

R KoncanDepartment of Pathology and Diagnostics, University of Verona, Strada Le Grazie 8, 37134, Verona, Italy. raffaella.koncan@univr.it.
M ParisatoO.U. of Microbiology and Virology, Department of Pathology and Diagnostics, Azienda Ospedaliera Universitaria Integrata di Verona, P.le A. Scuro 10, 37134, Verona, Italy.
C SakarikouClinical Microbiology Laboratories, Foundation Polyclinic Tor Vergata, V.le Oxford 81, 00133, Roma, Italy.
G StringariDepartment of Anesthesiological Sciences and Specialistic Surgeries, University of Verona, P.le A. Scuro 10, 37134, Verona, Italy.
C FontanaClinical Microbiology Laboratories, Foundation Polyclinic Tor Vergata, V.le Oxford 81, 00133, Roma, Italy.
V FavuzziDepartment of Pathology and Diagnostics, University of Verona, Strada Le Grazie 8, 37134, Verona, Italy.
M LigozziDepartment of Pathology and Diagnostics, University of Verona, Strada Le Grazie 8, 37134, Verona, Italy.
G Lo CascioO.U. of Microbiology and Virology, Department of Pathology and Diagnostics, Azienda Ospedaliera Universitaria Integrata di Verona, P.le A. Scuro 10, 37134, Verona, Italy.
University of Verona · ITAzienda Ospedaliera Universitaria Integrata Verona · ITPoliclinico Tor Vergata · ITUniversity of Rome Tor Vergata · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rapid detection of microorganisms in respiratory specimens is of paramount importance to drive the proper antibiotic regimen to prevent complications and transmission of infections. In the present study, the respiFISH® HAP Gram (-) Panel (miacom diagnostics GmbH, Duesseldorf, Germany) for the etiological diagnosis of hospital-acquired pneumonia was compared with the traditional culture method for the detection of major Gram-negative pathogens in respiratory specimens. respiFISH® combined the classical fluorescence in situ hybridization (FISH) technology with fluorescence-labeled DNA molecular beacons as probes. From September 2011 to January 2012, 165 samples were analyzed: the sensitivity and specificity were 94.39 and 87.93%, respectively. Only six pathogens (3.6%) were not identified with respiFISH®, while seven specimens (3%) provided false-positive results. This beacon-based identification shortens the time to result by at least one work day, providing species-level identification within half an hour. Considering the high sensitivity and specificity and the significant time saving, the introduction of bbFISH® assays could effectively complement traditional systems in microbiology laboratories.

Indexed as

Culture TechniquesIn Situ Hybridization, FluorescenceGram-Negative Bacterial InfectionsHumansMolecular Diagnostic TechniquesPneumoniaSensitivity and Specificity

Identifiers

PMID26219682
OpenAlexW1006733287

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.