Evidence map›Paper›PMID 26219299›Full record

ArticleGenetics2015

Longevity Genes Revealed by Integrative Analysis of Isoform-Specific daf-16/FoxO Mutants of Caenorhabditis elegans.

Albert Tzong-Yang Chen, Chunfang Guo, Omar A Itani, Breane G Budaitis, Travis W Williams, Christopher E Hopkins, Richard C McEachin, Manjusha Pande, Ana R Grant, Sawako Yoshina and 2 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
3.4field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 79 citations in OpenAlex.

  1. Bacterial pyruvate metabolism regulates host insulin sensitivity inbioRxiv : the preprint server for biology · 2026
    Article
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  3. DAF-16/FOXO maintains genome integrity following genotoxic stress.bioRxiv : the preprint server for biology · 2025
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  13. Screening Health-Promoting Compounds for Their Capacity to Induce the Activity of FOXO3.The journals of gerontology. Series A, Biological sciences and medical sciences · 2022
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  16. DistinctmicroPublication biology · 2022
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  19. Context-specific regulation of lysosomal lipolysis through network-level diverting of transcription factor interactions.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Albert Tzong-Yang ChenDepartment of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Chunfang GuoDepartment of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Omar A ItaniDepartment of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Breane G BudaitisDepartment of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Travis W WilliamsDepartment of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Christopher E HopkinsKnudra Transgenics, Murray, Utah 84123.
Richard C McEachinDepartment of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Manjusha PandeDepartment of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Ana R GrantDepartment of Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, Michigan 48109.
Sawako YoshinaDepartment of Physiology, Tokyo Women's Medical University School of Medicine, Tokyo, 162-8666, Japan.
Shohei MitaniDepartment of Physiology, Tokyo Women's Medical University School of Medicine, Tokyo, 162-8666, Japan.
Patrick J HuDepartment of Internal Medicine, University of Michigan Medical School, Ann Arbor, Michigan 48109 Department of Cell and Developmental Biology, University of Michigan Medical School, Ann Arbor, Michigan 48109 Institute of Gerontology, University of Michigan Medical School, Ann Arbor, Michigan 48109 pathu@umich.edu.ORCID http://orcid.org/0000-0003-2701-9505
University of Michigan–Ann Arbor · USTokyo Women's Medical University · JP

Funding

CELLULAR AND MOLECULAR BIOLOGY AT MICHIGANT32GM007315 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PUTHENVEEDU, MANOJKUMAR A · 1985 to 2021
$12.8M
Research Training in BiogerontologyT32AG000114 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SCOTT PLETCHER · 1985 to 2026
$12.4M
Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Aric L Daul, Ann E. Rougvie · 2012 to 2026
$7.5M
FoxO phosphorylation in the control of C. elegans lifespanR01AG041177 · NIA · VANDERBILT UNIVERSITY MEDICAL CENTER · PI HU, PATRICK J · 2012 to 2016
$1.6M
NIA NIH HHS R01 AG041177NIA NIH HHS T32 AG000114NIA NIH HHS T32AG000114NIGMS NIH HHS T32 GM007315NIH HHS P40 OD010440
6 · The paper itself

Abstract

FoxO transcription factors promote longevity across taxa. How they do so is poorly understood. In the nematode Caenorhabditis elegans, the A- and F-isoforms of the FoxO transcription factor DAF-16 extend life span in the context of reduced DAF-2 insulin-like growth factor receptor (IGFR) signaling. To elucidate the mechanistic basis for DAF-16/FoxO-dependent life span extension, we performed an integrative analysis of isoform-specific daf-16/FoxO mutants. In contrast to previous studies suggesting that DAF-16F plays a more prominent role in life span control than DAF-16A, isoform-specific daf-16/FoxO mutant phenotypes and whole transcriptome profiling revealed a predominant role for DAF-16A over DAF-16F in life span control, stress resistance, and target gene regulation. Integration of these datasets enabled the prioritization of a subset of 92 DAF-16/FoxO target genes for functional interrogation. Among 29 genes tested, two DAF-16A-specific target genes significantly influenced longevity. A loss-of-function mutation in the conserved gene gst-20, which is induced by DAF-16A, reduced life span extension in the context of daf-2/IGFR RNAi without influencing longevity in animals subjected to control RNAi. Therefore, gst-20 promotes DAF-16/FoxO-dependent longevity. Conversely, a loss-of-function mutation in srr-4, a gene encoding a seven-transmembrane-domain receptor family member that is repressed by DAF-16A, extended life span in control animals, indicating that DAF-16/FoxO may extend life span at least in part by reducing srr-4 expression. Our discovery of new longevity genes underscores the efficacy of our integrative strategy while providing a general framework for identifying specific downstream gene regulatory events that contribute substantially to transcription factor functions. As FoxO transcription factors have conserved functions in promoting longevity and may be dysregulated in aging-related diseases, these findings promise to illuminate fundamental principles underlying aging in animals.

Indexed as

Transcription, GeneticAgingAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsForkhead Transcription FactorsGene Expression Regulation, DevelopmentalInsulinLongevityMutationProtein IsoformsReceptors, SomatomedinSignal TransductionCaenorhabditis elegans Proteinsdaf-16 protein, C elegansForkhead Transcription FactorsInsulinProtein IsoformsReceptors, SomatomedinagingC. elegansFoxO transcription factorsinsulin-like growth factor signalinglongevity

Identifiers

PMID26219299
PMCPMC4596673
OpenAlexW2096129310

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.