Evidence map›Paper›PMID 26217933›Full record

ArticlePLoS computational biology2015

Decreasing-Rate Pruning Optimizes the Construction of Efficient and Robust Distributed Networks.

Saket Navlakha, Alison L Barth, Ziv Bar-Joseph

Abstract read
In one paragraph

Article in PLoS computational biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Intergenerational Effects of Stress - A Focus on Learning and Memory.Current topics in behavioral neurosciences · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Core Concept: How synaptic pruning shapes neural wiring during development and, possibly, in disease.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Saket NavlakhaCenter for Integrative Biology, The Salk Institute for Biological Studies, La Jolla, California, United States of America.
Alison L BarthDepartment of Biological Sciences, Center for the Neural Basis of Cognition, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.
Ziv Bar-JosephLane Center for Computational Biology, Machine Learning Department, Carnegie Mellon University, Pittsburgh, Pennsylvania, United States of America.

Funding

Dynamic connectivity in neocortical networksR01NS088958 · NINDS · CARNEGIE-MELLON UNIVERSITY · PI BARTH, ALISON L · 2016 to 2019
$1.3M
Synapse Elimination during Development: Pruning Rates, Models, and DiseasesF32MH099784 · NIMH · CARNEGIE-MELLON UNIVERSITY · PI NAVLAKHA, SAKET · 2013 to 2014
$61k
NIMH NIH HHS F32 MH099784NIMH NIH HHS F32-MH099784NINDS NIH HHS R01 NS088958
6 · The paper itself

Abstract

Robust, efficient, and low-cost networks are advantageous in both biological and engineered systems. During neural network development in the brain, synapses are massively over-produced and then pruned-back over time. This strategy is not commonly used when designing engineered networks, since adding connections that will soon be removed is considered wasteful. Here, we show that for large distributed routing networks, network function is markedly enhanced by hyper-connectivity followed by aggressive pruning and that the global rate of pruning, a developmental parameter not previously studied by experimentalists, plays a critical role in optimizing network structure. We first used high-throughput image analysis techniques to quantify the rate of pruning in the mammalian neocortex across a broad developmental time window and found that the rate is decreasing over time. Based on these results, we analyzed a model of computational routing networks and show using both theoretical analysis and simulations that decreasing rates lead to more robust and efficient networks compared to other rates. We also present an application of this strategy to improve the distributed design of airline networks. Thus, inspiration from neural network formation suggests effective ways to design distributed networks across several domains.

Indexed as

Models, NeurologicalAgingAnimalsBrainComputer SimulationConnectomeMiceModels, AnatomicNerve NetNeuronal PlasticitySynapses

Identifiers

PMID26217933
PMCPMC4517947

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.