Evidence map›Paper›PMID 26217670›Full record

ReviewFrontiers in molecular biosciences2015

Time-resolved infrared spectroscopic techniques as applied to channelrhodopsin.

Eglof Ritter, Ljiljana Puskar, Franz J Bartl, Emad F Aziz, Peter Hegemann, Ulrich Schade

Abstract readReview
In one paragraph

Review in Frontiers in molecular biosciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Review
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Eglof RitterExperimentelle Biophysik, Institut für Biologie, Humboldt-Universität zu Berlin Berlin, Germany.
Ljiljana PuskarMethods for Material Development, Helmholtz-Zentrum für Materialien und Energie GmbH Berlin, Germany.
Franz J BartlInstitut für medizinische Physik und Biophysik, Charité - Universitätsmedizin Berlin Berlin, Germany.
Emad F AzizMethods for Material Development, Helmholtz-Zentrum für Materialien und Energie GmbH Berlin, Germany ; Fachbereich Physik, Freie Universität Berlin Berlin, Germany.
Peter HegemannExperimentelle Biophysik, Institut für Biologie, Humboldt-Universität zu Berlin Berlin, Germany.
Ulrich SchadeMethods for Material Development, Helmholtz-Zentrum für Materialien und Energie GmbH Berlin, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Among optogenetic tools, channelrhodopsins, the light gated ion channels of the plasma membrane from green algae, play the most important role. Properties like channel selectivity, timing parameters or color can be influenced by the exchange of selected amino acids. Although widely used, in the field of neurosciences for example, there is still little known about their photocycles and the mechanism of ion channel gating and conductance. One of the preferred methods for these studies is infrared spectroscopy since it allows observation of proteins and their function at a molecular level and in near-native environment. The absorption of a photon in channelrhodopsin leads to retinal isomerization within femtoseconds, the conductive states are reached in the microsecond time scale and the return into the fully dark-adapted state may take more than minutes. To be able to cover all these time regimes, a range of different spectroscopical approaches are necessary. This mini-review focuses on time-resolved applications of the infrared technique to study channelrhodopsins and other light triggered proteins. We will discuss the approaches with respect to their suitability to the investigation of channelrhodopsin and related proteins.

Indexed as

channelrhodopsinFTIRinfrared spectroscopyIR-spectrometerretinal proteinstime-resolved spectroscopy

Identifiers

PMID26217670
PMCPMC4493399

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.