Evidence map›Paper›PMID 26216839›Full record

ReviewGastroenterology2015

Epigenetic Alterations in Colorectal Cancer: Emerging Biomarkers.

Yoshinaga Okugawa, William M Grady, Ajay Goel

2 registry-linked trialsAbstract readReview
In one paragraph

Review in Gastroenterology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 436 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
436citing papers in PubMed, 2 pooled it
23.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06271980 completednot on this mapstarted 2023, after this paper: background citation

Predicting Long-Term Recurrence-Free and Overall Survival in Early-Onset Colorectal Cancer Survivors

TypeobservationalSponsorCity of Hope Medical CenterRan2023 to 2024Enrolled177ConditionsColorectal Cancer Recurrent, Colorectal Cancer, Colorectal Neoplasms, Colorectal AdenocarcinomaArmsENCORE
NCT06342427 completednot on this mapstarted 2023, after this paper: background citation

Early Detection of Stomach Cancer With a Liquid Biopsy Based on Exosomal Micro-RNA

TypeobservationalSponsorCity of Hope Medical CenterRan2023 to 2024Enrolled809ConditionsGastric Cancer, Gastric Adenocarcinoma, Gastric Cancer Stage, Gastric NeoplasmArmsDESTINEX
3 · Its place in the literature

Who cites it

436 citing papers in PubMed, 2 syntheses or guidelines pooled it, 807 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Evaluating the utility ofEpigenetics · 2024
    Trial
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Glycolysis enzymes and cellular lactylation in tumour.Clinical and translational medicine · 2026
    Review
  19. Advances in Colorectal Cancer Cell Biology and Clonal Evolution.International journal of molecular sciences · 2026
    Review
  20. Review

376 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Yoshinaga OkugawaGastrointestinal Cancer Research Laboratory, Division of Gastroenterology, Department of Internal Medicine, Charles A. Sammons Cancer Center and Baylor Research Institute, Baylor University Medical Center, Dallas, Texas.
William M GradyClinical Research Division, Fred Hutchinson Cancer Research Center, Seattle, Washington; Division of Gastroenterology, University of Washington School of Medicine, Seattle, Washington. Electronic address: wgrady@fredhutch.org.
Ajay GoelGastrointestinal Cancer Research Laboratory, Division of Gastroenterology, Department of Internal Medicine, Charles A. Sammons Cancer Center and Baylor Research Institute, Baylor University Medical Center, Dallas, Texas. Electronic address: ajay.goel@baylorhealth.edu.
Baylor University Medical Center · USFred Hutch Cancer Center · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
Tumor mutation signaturesP01CA077852 · NCI · UNIVERSITY OF WASHINGTON · PI MONNAT, RAYMOND J · 1999 to 2019
$26.0M
Trans-NetworkU54CA143862 · NCI · ARIZONA STATE UNIVERSITY-TEMPE CAMPUS · PI GRADY, WILLIAM MALLORY · 2009 to 2013
$8.4M
Identify and validate novel epigenetic molecular markers for colorectal neoplasmU01CA152756 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY, GUDA, KISHORE · 2010 to 2021
$6.7M
The Biology and Diagnosis of HNPCCR01CA072851 · NCI · UNIVERSITY OF CALIFORNIA SAN DIEGO · PI GOEL, AJAY · 1996 to 2019
$6.6M
Aspirin and Cancer Prevention in Lynch Syndrome: From Cell to Population DataU01CA187956 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI GOEL, AJAY, WODARZ, DOMINIK F · 2014 to 2018
$2.7M
Development of microRNA Biomarkers For Noninvasive Detection of Colorectal CancerR01CA184792 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI GOEL, AJAY · 2015 to 2019
$1.8M
TGF-beta signaling and colon cancerR01CA115513 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY · 2007 to 2011
$1.6M
(PQC1) Accelerated biological aging and colon polyp to cancer progressionR01CA194663 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI GRADY, WILLIAM MALLORY · 2015 to 2018
$1.6M
METHYLATION BIOMARKER DEVELOPMENT FOR NONINVASIVE DETECTION OF COLORECTAL CANCERR01CA181572 · NCI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI GOEL, AJAY · 2014 to 2018
$1.6M
NCI NIH HHS CA181572NCI NIH HHS CA184792NCI NIH HHS P01 CA077852NCI NIH HHS P01CA077852NCI NIH HHS P30 CA015704NCI NIH HHS P30CA15704NCI NIH HHS R01 CA072851NCI NIH HHS R01 CA115513NCI NIH HHS R01 CA181572NCI NIH HHS R01 CA184792NCI NIH HHS R01 CA194663NCI NIH HHS R01CA194663NCI NIH HHS R01 CA72851NCI NIH HHS U01 CA152756NCI NIH HHS U01CA152756NCI NIH HHS U01 CA187956NCI NIH HHS U54 CA143862NCI NIH HHS U54CA143862
6 · The paper itself

Abstract

Colorectal cancer (CRC) is a leading cause of cancer deaths worldwide. One of the fundamental processes driving the initiation and progression of CRC is the accumulation of a variety of genetic and epigenetic changes in colonic epithelial cells. Over the past decade, major advances have been made in our understanding of cancer epigenetics, particularly regarding aberrant DNA methylation, microRNA (miRNA) and noncoding RNA deregulation, and alterations in histone modification states. Assessment of the colon cancer "epigenome" has revealed that virtually all CRCs have aberrantly methylated genes and altered miRNA expression. The average CRC methylome has hundreds to thousands of abnormally methylated genes and dozens of altered miRNAs. As with gene mutations in the cancer genome, a subset of these epigenetic alterations, called driver events, are presumed to have a functional role in CRC. In addition, the advances in our understanding of epigenetic alterations in CRC have led to these alterations being developed as clinical biomarkers for diagnostic, prognostic, and therapeutic applications. Progress in this field suggests that these epigenetic alterations will be commonly used in the near future to direct the prevention and treatment of CRC.

Indexed as

Gene Expression RegulationBiomarkersColorectal NeoplasmsDNA MethylationEpigenomicsHistonesHumansMicroRNAsPrognosisRNA, UntranslatedBiomarkersHistonesMicroRNAsRNA, UntranslatedDNA MethylationHistone ModificationLong Noncoding RNAMicroRNA

Identifiers

PMID26216839
PMCPMC4589488
OpenAlexW1639623904

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.