Evidence map›Paper›PMID 26216141›Full record

ArticleThe journal of histochemistry and cytochemistry : official journal of the Histochemistry Society2015

Determination of Optimal Sample Size for Quantification of β-Cell Area, Amyloid Area and β-Cell Apoptosis in Isolated Islets.

Daniel T Meier, Leon Entrup, Andrew T Templin, Meghan F Hogan, Thanya Samarasekera, Sakeneh Zraika, Edward J Boyko, Steven E Kahn

Open access · bronzeAbstract read
In one paragraph

Article in The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. RNA-seq-based identification of Star upregulation by islet amyloid formation.Protein engineering, design & selection : PEDS · 2019
    Article
  5. Islet Microvasculature Alterations With Loss of Beta-cells in Patients With Type 1 Diabetes.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2019
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. PIK3CD promoted proliferation in diffuse large B cell lymphoma through upregulation of c-myc.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  11. Clinicopathological significance of p38β, p38γ, and p38δ and its biological roles in esophageal squamous cell carcinoma.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Article
  12. Article
  13. Article
  14. Histochemical Insights into Pancreatic Islet Biology.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Daniel T MeierDivision of Metabolism, Endocrinology and Nutrition, VA Puget Sound Health Care System and University of Washington, Seattle, Washington (DTM, LE, ATT, MFH, TS, SZ, SEK)
Leon EntrupDivision of Metabolism, Endocrinology and Nutrition, VA Puget Sound Health Care System and University of Washington, Seattle, Washington (DTM, LE, ATT, MFH, TS, SZ, SEK)
Andrew T TemplinDivision of Metabolism, Endocrinology and Nutrition, VA Puget Sound Health Care System and University of Washington, Seattle, Washington (DTM, LE, ATT, MFH, TS, SZ, SEK)
Meghan F HoganDivision of Metabolism, Endocrinology and Nutrition, VA Puget Sound Health Care System and University of Washington, Seattle, Washington (DTM, LE, ATT, MFH, TS, SZ, SEK)
Thanya SamarasekeraDivision of Metabolism, Endocrinology and Nutrition, VA Puget Sound Health Care System and University of Washington, Seattle, Washington (DTM, LE, ATT, MFH, TS, SZ, SEK)
Sakeneh ZraikaDivision of Metabolism, Endocrinology and Nutrition, VA Puget Sound Health Care System and University of Washington, Seattle, Washington (DTM, LE, ATT, MFH, TS, SZ, SEK)
Edward J BoykoSeattle Epidemiologic Research and Information Center, VA Puget Sound Health Care System and Division of General Internal Medicine, VA Puget Sound Health Care System and University of Washington, Seattle, Washington (EJB)
Steven E KahnDivision of Metabolism, Endocrinology and Nutrition, VA Puget Sound Health Care System and University of Washington, Seattle, Washington (DTM, LE, ATT, MFH, TS, SZ, SEK)
University of Washington · USVA Puget Sound Health Care System · US

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Karin E Bornfeldt · 1986 to 2026
$41.4M
Diabetes, Obesity and Metabolism Training ProgramT32DK007247 · NIDDK · UNIVERSITY OF WASHINGTON · PI GREGORY J MORTON, KRISTINA Marie UTZSCHNEIDER · 1986 to 2026
$10.0M
Nutrition, Obesity and Atherosclerosis Training ProgramT32HL007028 · NHLBI · UNIVERSITY OF WASHINGTON · PI Karin E Bornfeldt · 1985 to 2026
$6.4M
The role of neprilysin in pancreatic beta-cell dysfunction and deathR00DK080945 · NIDDK · UNIVERSITY OF WASHINGTON · PI ZRAIKA, SAKENEH · 2011 to 2013
$737k
The role of neprilysin in pancreatic beta-cell dysfunction and deathK99DK080945 · NIDDK · UNIVERSITY OF WASHINGTON · PI ZRAIKA, SAKENEH · 2009 to 2010
$180k
Pathogenesis and Impact of Islet AmyloidI01BX001060 · VA · VA PUGET SOUND HEALTHCARE SYSTEM · PI Pandora Luke Januszewski · 2011 to 2026
–
BLRD VA I01 BX001060NHLBI NIH HHS T32 HL007028NIDDK NIH HHS DK-007247NIDDK NIH HHS DK-017047NIDDK NIH HHS DK-080945NIDDK NIH HHS K99 DK080945NIDDK NIH HHS P30 DK017047NIDDK NIH HHS R00 DK080945NIDDK NIH HHS T32 DK007247
6 · The paper itself

Abstract

Culture of isolated rodent islets is widely used in diabetes research to assess different endpoints, including outcomes requiring histochemical staining. As islet yields during isolation are limited, we determined the number of islets required to obtain reliable data by histology. We found that mean values for insulin-positive β-cell area/islet area, thioflavin S-positive amyloid area/islet area and β-cell apoptosis do not vary markedly when more than 30 islets are examined. Measurement variability declines as more islets are quantified, so that the variability of the coefficient of variation (CV) in human islet amyloid polypeptide (hIAPP) transgenic islets for β-cell area/islet area, amyloid area/islet area and β-cell apoptosis are 13.20% ± 1.52%, 10.03% ± 1.76% and 6.78% ± 1.53%, respectively (non-transgenic: 7.65% ± 1.17% β-cell area/islet area and 8.93% ± 1.56% β-cell apoptosis). Increasing the number of islets beyond 30 had marginal effects on the CV. Using 30 islets, 6 hIAPP-transgenic preparations are required to detect treatment effects of 14% for β-cell area/islet area, 30% for amyloid area/islet area and 23% for β-cell apoptosis (non-transgenic: 9% for β-cell area/islet area and 45% for β-cell apoptosis). This information will be of value in the design of studies using isolated islets to examine β cells and islet amyloid.

Indexed as

ApoptosisAnimalsFemaleInsulin-Secreting CellsIslet Amyloid PolypeptideIslets of LangerhansMaleMiceMice, Inbred C57BLMice, TransgenicSample SizeIslet Amyloid Polypeptideamyloidapoptosishistologyimmunohistochemistryinsulinislet isolationpancreatic isletstainingβ cell

Identifiers

PMID26216141
PMCPMC4530400
OpenAlexW2100081739

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.