Evidence map›Paper›PMID 26215742›Full record

ArticleBiochimica et biophysica acta2015

Ceramide channels: destabilization by Bcl-xL and role in apoptosis.

Kai-Ti Chang, Andriy Anishkin, Gauri A Patwardhan, Levi J Beverly, Leah J Siskind, Marco Colombini

Abstract read
In one paragraph

Article in Biochimica et biophysica acta, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 65 citations in OpenAlex.

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  16. HumanInternational journal of biological sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Kai-Ti ChangDepartment of Biology, University of Maryland, United States.
Andriy AnishkinDepartment of Biology, University of Maryland, United States.
Gauri A PatwardhanDepartment of Pharmacology and Toxicology, University of Louisville, United States.
Levi J BeverlyDepartment of Pharmacology and Toxicology, University of Louisville, United States; James Graham Brown Cancer Center, University of Louisville, United States; Department of Medicine, University of Louisville, United States.
Leah J SiskindDepartment of Pharmacology and Toxicology, University of Louisville, United States; James Graham Brown Cancer Center, University of Louisville, United States.
Marco ColombiniDepartment of Biology, University of Maryland, United States. Electronic address: colombini@umd.edu.
University of Louisville · USUniversity of Maryland, College Park · USUniversity of Maryland, Baltimore · US

Funding

Role of Ceramide-induced Kidney Cell Death in Acute Kidney InjuryR01DK093462 · NIDDK · UNIVERSITY OF LOUISVILLE · PI SISKIND, LEAH J · 2012 to 2016
$1.6M
Channel Formation by Ceramides: Implication on ApoptosisR01NS042025 · NINDS · UNIV OF MARYLAND, COLLEGE PARK · PI COLOMBINI, MARCO · 2003 to 2006
$841k
NIDDK NIH HHS R01 DK093462NIDDK NIH HHS R01DK093462NINDS NIH HHS R01 NS042025
6 · The paper itself

Abstract

Ceramide is a bioactive sphingolipid involved in mitochondrial-mediated apoptosis. Our data suggest that ceramides directly regulate a key initiation step in apoptosis: mitochondrial outer membrane permeabilization (MOMP). MOMP allows release of intermembrane space proteins to the cytosol, inducing the execution of the cell. Ceramides form channels in planar phospholipid membranes and outer membranes of isolated mitochondria, channels large enough to facilitate passage of proteins released during MOMP. Bcl-xL inhibits MOMP in vivo and inhibits the formation of ceramide channels in vitro. However the significance of Bcl-xL's regulation of ceramide channel formation within cells was untested. We engineered Bcl-xL point mutations that specifically affect the interaction between ceramide and Bcl-xL to probe the mechanism of ceramide channel regulation and the role of ceramide channels in apoptosis. Using these mutants and fluorescently-labeled ceramide, we identified the hydrophobic groove on Bcl-xL as the critical ceramide binding site and regulator of ceramide channel formation. Bcl-xL mutants with weakened interaction with ceramide also have reduced ability to interfere with ceramide channel formation. Some mutants have similar altered ability to inhibit both ceramide and Bax channel formation, whereas others act differentially, suggesting distinct but overlapping binding sites. To probe the relative importance of these channels in apoptosis, Bcl-xL mutant proteins were stably expressed in Bcl-xL deficient cells. Weakening the inhibition of either Bax or ceramide channels decreased the ability of Bcl-xL to protect cells from apoptosis in a stimulus-dependent manner. These studies provide the first in vivo evidence for the role of ceramide channels in MOMP.

Indexed as

AnimalsApoptosisbcl-X ProteinBinding SitesCell Membrane PermeabilityCells, CulturedCeramidesHumansMiceMitochondria, LiverMitochondrial MembranesMolecular Dynamics SimulationProtein BindingRatsRats, Sprague-DawleyBcl2l1 protein, ratbcl-X ProteinCeramidesApoptosisBaxBcl-2MitochondriaOuter membraneSphingolipid

Identifiers

PMID26215742
PMCPMC4554889
OpenAlexW1024647727

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.