Evidence map›Paper›PMID 26215380›Full record

ArticleNature communications2015

The iBeetle large-scale RNAi screen reveals gene functions for insect development and physiology.

Christian Schmitt-Engel, Dorothea Schultheis, Jonas Schwirz, Nadi Ströhlein, Nicole Troelenberg, Upalparna Majumdar, Van Anh Dao, Daniela Grossmann, Tobias Richter, Maike Tech and 23 more

Abstract read
In one paragraph

Article in Nature communications, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 87 papers.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

87 citing papers in PubMed.

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  12. In the Spotlight-Established Researcher.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2025
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  20. Temporal control of RNAi reveals both robust and labile feedback loops in the segmentation clock of the red flour beetle.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article

27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

33 authors.

Christian Schmitt-Engel1] Johann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany [2] Department Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Dorothea SchultheisDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Jonas SchwirzJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Nadi StröhleinDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Nicole TroelenbergDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Upalparna MajumdarDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Van Anh DaoInstitut für Entwicklungsbiologie, Universität zu Köln, Zülpicher Straße 47b, 50674 Cologne, Germany.
Daniela GrossmannJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Tobias RichterDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Maike TechAbteilung Bioinformatik, Institut für Mikrobiologie und Genetik, Georg-August-Universität Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany.
Jürgen Dönitz1] Johann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany [2] Abteilung Bioinformatik, Institut für Mikrobiologie und Genetik, Georg-August-Universität Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany [3] Abteilung für Bioinformatik, Universitätsmedizin Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany.
Lizzy GerischerInstitut für Mathematik und Informatik, Ernst Moritz Arndt Universität Greifswald, Walther-Rathenau-Straße 47, 17487 Greifswald, Germany.
Mirko Theis1] TU Dresden, Medical Faculty Carl Gustav Carus, Medical Systems Biology, Fetscherstr. 74, 01307 Dresden, Germany [2] Eupheria Biotech GmbH, Dresden, Germany.
Inga SchildJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Jochen TraunerDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Nikolaus D B KoniszewskiJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Elke KüsterJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Sebastian KittelmannJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Yonggang HuJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Sabrina LehmannJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Janna SiemanowskiJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Julia UlrichJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Kristen A PanfilioInstitut für Entwicklungsbiologie, Universität zu Köln, Zülpicher Straße 47b, 50674 Cologne, Germany.
Reinhard SchröderAbteilung für Genetik, Universität Rostock, Albert-Einsteinstr. 3, 18059 Rostock, Germany.
Burkhard MorgensternAbteilung Bioinformatik, Institut für Mikrobiologie und Genetik, Georg-August-Universität Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany.
Mario StankeInstitut für Mathematik und Informatik, Ernst Moritz Arndt Universität Greifswald, Walther-Rathenau-Straße 47, 17487 Greifswald, Germany.
Frank BuchhholzTU Dresden, Medical Faculty Carl Gustav Carus, Medical Systems Biology, Fetscherstr. 74, 01307 Dresden, Germany.
Manfred FraschDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.ORCID 0000000313739798
Siegfried RothInstitut für Entwicklungsbiologie, Universität zu Köln, Zülpicher Straße 47b, 50674 Cologne, Germany.
Ernst A WimmerJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.
Michael SchoppmeierDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Martin KlinglerDepartment Biologie, Entwicklungsbiologie, Friedrich-Alexander-Universität Erlangen-Nürnberg, Staudtstraße 5, 91058 Erlangen, Germany.
Gregor BucherJohann-Friedrich-Blumenbach-Institut, GZMB, Georg-August-Universität Göttingen, Justus-von-Liebig-Weg 11, 37077 Göttingen, Germany.ORCID 0000000246156401

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic screens are powerful tools to identify the genes required for a given biological process. However, for technical reasons, comprehensive screens have been restricted to very few model organisms. Therefore, although deep sequencing is revealing the genes of ever more insect species, the functional studies predominantly focus on candidate genes previously identified in Drosophila, which is biasing research towards conserved gene functions. RNAi screens in other organisms promise to reduce this bias. Here we present the results of the iBeetle screen, a large-scale, unbiased RNAi screen in the red flour beetle, Tribolium castaneum, which identifies gene functions in embryonic and postembryonic development, physiology and cell biology. The utility of Tribolium as a screening platform is demonstrated by the identification of genes involved in insect epithelial adhesion. This work transcends the restrictions of the candidate gene approach and opens fields of research not accessible in Drosophila.

Indexed as

RNA InterferenceAnimalsColeopteraEmbryonic DevelopmentHigh-Throughput Nucleotide SequencingInsect ProteinsLarvaMetamorphosis, BiologicalOogenesisPupaTriboliumInsect Proteins

Identifiers

PMID26215380
PMCPMC4525174

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