Evidence map›Paper›PMID 26215087›Full record

ArticleVirus genes2015

P2 of Rice grassy stunt virus (RGSV) and p6 and p9 of Rice ragged stunt virus (RRSV) isolates from Vietnam exert suppressor activity on the RNA silencing pathway.

Thanh Duc Nguyen, Séverine Lacombe, Martine Bangratz, Hoang Anh Ta, Do Nang Vinh, Pascal Gantet, Christophe Brugidou

Abstract read
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In one paragraph

Article in Virus genes, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
  2. Role of Plant Virus Movement Proteins in Suppression of Host RNAi Defense.International journal of molecular sciences · 2023
    Review
  3. Article
  4. Article
  5. Optimized RNA-Silencing Strategies forPlants (Basel, Switzerland) · 2021
    Article
  6. Review
  7. Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Thanh Duc NguyenIRD, UMR IPME, Avenue Agropolis, 34398, Montpellier Cedex, France.
Séverine LacombeIRD, UMR IPME, Avenue Agropolis, 34398, Montpellier Cedex, France.
Martine BangratzIRD, UMR IPME, Avenue Agropolis, 34398, Montpellier Cedex, France.
Hoang Anh TaPlant Protection Research Institute (PPRI), Hanoi, Vietnam.
Do Nang VinhIRD, LMI RICE, Agricultural Genetics Institute, Université des Sciences et Techniques d'Hanoi, Hanoi, Vietnam.
Pascal GantetIRD, LMI RICE, Agricultural Genetics Institute, Université des Sciences et Techniques d'Hanoi, Hanoi, Vietnam.
Christophe BrugidouIRD, UMR IPME, Avenue Agropolis, 34398, Montpellier Cedex, France. christophe.brugidou@ird.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Vietnam, the two main viruses that cause disease in rice are the Rice grassy stunt virus (RGSV) and the Rice ragged stunt virus (RRSV). Outbreaks of these two viruses have dramatically decreased rice production in Vietnam. Because natural resistance genes are unknown, an RNAi strategy may be an alternative method to develop resistance to RGSV and RRSV. However, this strategy will be efficient only if putative silencing suppressors encoded by the two viruses are neutralized. To identify these suppressors, we used the classical green fluorescent protein (GFP) agroinfiltration method in Nicotiana benthamiana. Then, we investigated the effects of viral candidate proteins on GFP expression and GFP siRNA accumulation and their interference with the short- or long-range signal of silencing. RGSV genes s2gp1, s5gp2, and s6gp1 and RRSV genes s5gp1, s6gp1, s9gp1, and s10gp1 were selected for viral silencing suppressor investigation according to their small molecular weight, the presence of cysteines, or the presence of a GW motif in related protein products. We confirmed that protein p6 of RRSV displays mild silencing suppressor activity and affects long-range silencing by delaying the systemic silencing signal. In addition, we identified two new silencing suppressors that displayed mild activity: p2 of RGSV and p9 of RRSV.

Indexed as

Host-Pathogen InteractionsRNA InterferenceGenes, ReporterGreen Fluorescent ProteinsNicotianaOryzaReoviridaeTenuivirusVietnamViral ProteinsGreen Fluorescent ProteinsViral ProteinsRice grassy stunt virusRice production in VietnamRice ragged stunt virusRice virusesSilencing suppressors

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.