Evidence map›Paper›PMID 26214369›Full record

ArticleNature neuroscience2015

LSD1n is an H4K20 demethylase regulating memory formation via transcriptional elongation control.

Jianxun Wang, Francesca Telese, Yuliang Tan, Wenbo Li, Chunyu Jin, Xin He, Harihar Basnet, Qi Ma, Daria Merkurjev, Xiaoyan Zhu and 10 more

Open access · greenAbstract read
In one paragraph

Article in Nature neuroscience, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 99 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
99citing papers in PubMed, 1 pooled it
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

99 citing papers in PubMed, 1 synthesis or guideline pooled it, 169 citations in OpenAlex.

  1. Pooled it
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  3. Review
  4. Review
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  7. Article
  8. Evaluation of [EJNMMI research · 2025
    Article
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  11. Article
  12. Review
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  14. Article
  15. Discovery and structural studies of histone demethylases.Frontiers in epigenetics and epigenomics · 2025
    Review
  16. Article
  17. Review
  18. Review
  19. Article
  20. Article

39 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 4 countries.

Jianxun WangHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Francesca TeleseHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Yuliang TanHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.ORCID http://orcid.org/0000-0002-3146-8218
Wenbo LiHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Chunyu JinHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Xin HeCollege of Basic Medicine, Beijing University of Chinese Medicine, Beijing, China.
Harihar BasnetHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Qi MaHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Daria MerkurjevHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Xiaoyan ZhuHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Zhijie LiuHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Jie ZhangHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Kenny OhgiHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Havilah TaylorHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Ryan R WhiteDepartment of Genetics and Medicine, Institute for Aging Research, Albert Einstein College of Medicine, Bronx, New York, USA.
Cagdas TazearslanDepartment of Genetics and Medicine, Institute for Aging Research, Albert Einstein College of Medicine, Bronx, New York, USA.
Yousin SuhDepartment of Genetics and Medicine, Institute for Aging Research, Albert Einstein College of Medicine, Bronx, New York, USA.
Todd S MacfarlanNational Institute of Child Health and Human Development, US National Institutes of Health, Bethesda, Maryland, USA.
Samuel L PfaffHoward Hughes Medical Institute, Gene Expression Laboratory, The Salk Institute for Biological Studies, La Jolla, California, USA.
Michael G RosenfeldHoward Hughes Medical Institute, Department of Medicine, University of California, San Diego, La Jolla, California, USA.
Howard Hughes Medical Institute · USAlbert Einstein College of Medicine · USBeijing University of Chinese Medicine · CNNational Institute of Child Health · HUSalk Institute for Biological Studies · US

Funding

Viral Vector Core (VVC)P30CA014195 · NCI · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Ye Zheng · 1985 to 2026
$82.8M
Mechanisms of Mammalian Epigenome ReprogrammingZIAHD008933 · NICHD · EUNICE KENNEDY SHRIVER NATIONAL INSTITUTE OF CHILD HEALTH & HUMAN DEVELOPMENT · PI MACFARLAN, TODD SCOTT · 2013 to 2025
$19.1M
HORMONAL AND DEVELOPMENTAL REGULATION OF GENE EXPRESSIONR01DK018477 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ROSENFELD, MICHAEL G · 1986 to 2025
$12.7M
REGULATION OF NEUROENDOCRINE SWITCHING EVENTSR37DK039949 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ROSENFELD, MICHAEL G · 1987 to 2020
$12.3M
Ligand Regulated Epigenetic/Nuclear Architectural Strategies and Human DiseaseR01NS034934 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ROSENFELD, MICHAEL G · 1995 to 2013
$6.8M
Enhancer TherapyR01CA173903 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLASS, CHRISTOPHER K · 2012 to 2016
$6.3M
MOLECULAR MECHANISMS OF AORTIC AND PULMONARY DEFECTSR01HL065445 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ROSENFELD, MICHAEL G · 2000 to 2014
$5.3M
MOLECULAR BIOLOGICAL APPROACHES TO ENDOCRINOLOGYT32DK007541 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GAULTON, KYLE JEFFRIE, MAJITHIA, AMIT · 1987 to 2022
$4.5M
LIM GENE CONTROL OF MOTOR NEURON DEVELOPMENTR01NS037116 · NINDS · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI PFAFF, SAMUEL L. · 1997 to 2006
$3.4M
Repressors in Prostate CancerR01CA097134 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ROSENFELD, MICHAEL G · 2002 to 2012
$3.2M
New Methods to Uncover Global Transcriptional Programs for Disease Risk VariantsR01GM104459 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SUH, YOUSIN · 2013 to 2016
$2.5M
REGULATION OF NEUROENDOCRINE SWITCHING EVENTSR01DK039949 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ROSENFELD, MICHAEL G · 1996 to 2024
$2.4M
Howard Hughes Medical InstituteNCI NIH HHS CA173903NCI NIH HHS P30 CA014195NCI NIH HHS R01 CA097134NCI NIH HHS R01 CA173903NHLBI NIH HHS HL065445NHLBI NIH HHS R01 HL065445NIDDK NIH HHS DK018477NIDDK NIH HHS DK039949NIDDK NIH HHS R01 DK018477NIDDK NIH HHS R01 DK039949NIDDK NIH HHS R37 DK039949NIDDK NIH HHS T32 DK007541NIGMS NIH HHS R01 GM104459NIGMS NIH HHS R01GM104459-01NINDS NIH HHS NS034934NINDS NIH HHS R01 NS034934NINDS NIH HHS R01 NS037116NINDS NIH HHS R01 NS054172NINDS NIH HHS R37NS5037116
6 · The paper itself

Abstract

We found that a neuron-specific isoform of LSD1, LSD1n, which results from an alternative splicing event, acquires a new substrate specificity, targeting histone H4 Lys20 methylation, both in vitro and in vivo. Selective genetic ablation of LSD1n led to deficits in spatial learning and memory, revealing the functional importance of LSD1n in neuronal activity-regulated transcription that is necessary for long-term memory formation. LSD1n occupied neuronal gene enhancers, promoters and transcribed coding regions, and was required for transcription initiation and elongation steps in response to neuronal activity, indicating the crucial role of H4K20 methylation in coordinating gene transcription with neuronal function. Our results indicate that this alternative splicing of LSD1 in neurons, which was associated with altered substrate specificity, serves as a mechanism acquired by neurons to achieve more precise control of gene expression in the complex processes underlying learning and memory.

Indexed as

AnimalsCells, CulturedCerebral CortexFemaleGene DeletionHistone DemethylasesHistonesMaleMemory, Long-TermMethylationMiceMice, Inbred C57BLMice, KnockoutMice, TransgenicTranscription, GeneticHistone DemethylasesHistonesKDM1a protein, mouse

Identifiers

PMID26214369
PMCPMC4625987
OpenAlexW1017678247

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.