Evidence map›Paper›PMID 26208873›Full record

ArticleNeuroImage2015

MRI compatible optrodes for simultaneous LFP and optogenetic fMRI investigation of seizure-like afterdischarges.

Ben A Duffy, ManKin Choy, Miguel R Chuapoco, Michael Madsen, Jin Hyung Lee

Abstract read
In one paragraph

Article in NeuroImage, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 46 citations in OpenAlex.

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  13. Multi-scale neural decoding and analysis.Journal of neural engineering · 2021
    Review
  14. Hybrid Electrical and Optical Neural Interfaces.Journal of micromechanics and microengineering : structures, devices, and systems · 2021
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Ben A DuffyDepartment of Neurology and Neurological Sciences, Stanford University, CA 94305 Stanford, CA, USA.
ManKin ChoyDepartment of Neurology and Neurological Sciences, Stanford University, CA 94305 Stanford, CA, USA.
Miguel R ChuapocoDepartment of Neurology and Neurological Sciences, Stanford University, CA 94305 Stanford, CA, USA.
Michael MadsenDepartment of Neurology and Neurological Sciences, Stanford University, CA 94305 Stanford, CA, USA.
Jin Hyung LeeDepartment of Neurology and Neurological Sciences, Stanford University, CA 94305 Stanford, CA, USA; Department of Bioengineering, Stanford University, CA 94305 Stanford, CA, USA; Department of Neurosurgery, Stanford University, CA 94305 Stanford, CA, USA; Department of Electrical Engineering, Stanford University, CA 94305 Stanford, CA, USA. Electronic address: ljinhy@stanford.edu.
Stanford University · US

Funding

Dynamic regulation of whole brain circuit function by basal ganglia pathwaysR01NS091461 · NINDS · STANFORD UNIVERSITY · PI LEE, JIN HYUNG · 2015 to 2019
$2.4M
In Vivo Control and Functional Visualization of Stem Cell-Driven CNS RegenerationDP2OD007265 · OD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LEE, JIN HYUNG · 2010 to 2010
$2.4M
Deconstructing Arousal Regulation Circuits for Optimal DBS Therapy DesignR01NS087159 · NINDS · STANFORD UNIVERSITY · PI LEE, JIN HYUNG · 2014 to 2018
$1.9M
Direct Visualization of Cell-Type Specific AD Networks for Drug DevelopmentRF1AG047666 · NIA · STANFORD UNIVERSITY · PI LEE, JIN HYUNG · 2014 to 2014
$1.8M
Visualization of Neuro-Molecular Targeting using Distribution-Free, High-Res fMRIR00EB008738 · NIBIB · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LEE, JIN HYUNG · 2010 to 2012
$745k
NIA NIH HHS RF1 AG047666NIBIB NIH HHS 4R00EB008738NIBIB NIH HHS R00 EB008738NIH HHS 1DP2OD007265NIH HHS DP2 OD007265NINDS NIH HHS R01 NS087159NINDS NIH HHS R01NS087159NINDS NIH HHS R01 NS091461
6 · The paper itself

Abstract

In preclinical studies, implanted electrodes can cause severe degradation of MRI images and hence are seldom used for chronic studies employing functional magnetic resonance imaging. In this study, we developed carbon fiber optrodes (optical fiber and electrode hybrid devices), which can be utilised in chronic longitudinal studies aiming to take advantage of emerging optogenetic technologies, and compared them with the more widely used tungsten optrodes. We find that optrodes constructed using small diameter (~130 μm) carbon fiber electrodes cause significantly reduced artifact on functional MRI images compared to those made with 50 μm diameter tungsten wire and at the same time the carbon electrodes have lower impedance, which leads to higher quality LFP recordings. In order to validate this approach, we use these devices to study optogenetically-induced seizure-like afterdischarges in rats sedated with dexmedetomidine and compare these to sub (seizure) threshold stimulations in the same animals. The results indicate that seizure-like afterdischarges involve several extrahippocampal brain regions that are not recruited by subthreshold optogenetic stimulation of the hippocampus at 20 Hz. Subthreshold stimulation led to activation of the entire ipsilateral hippocampus and septum, whereas afterdischarges additionally produced activations in the contralateral hippocampal formation, neocortex, cerebellum, nucleus accumbens, and thalamus. Although we demonstrate just one application, given the ease of fabrication, we anticipate that carbon fiber optrodes could be utilised in a variety of studies that could benefit from longitudinal optogenetic functional magnetic resonance imaging.

Indexed as

Electrodes, ImplantedMembrane PotentialsAction PotentialsAnimalsArtifactsBrainBrain MappingBrain WavesElectric ImpedanceHippocampusMagnetic Resonance ImagingMaleMicroelectrodesOptogeneticsRatsRats, Sprague-DawleyTungstenCarbon fiberElectrodeEpilepsyfMRIHippocampusofMRIOptogeneticsOptrode

Identifiers

PMID26208873
PMCPMC5573166
OpenAlexW1002208686

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.