Evidence map›Paper›PMID 26208139›Full record

ArticleThe ISME journal2016

Co-occurring Synechococcus ecotypes occupy four major oceanic regimes defined by temperature, macronutrients and iron.

Jill A Sohm, Nathan A Ahlgren, Zachary J Thomson, Cheryl Williams, James W Moffett, Mak A Saito, Eric A Webb, Gabrielle Rocap

Abstract read
In one paragraph

Article in The ISME journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed.

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  8. Rival phytoplankton contribute to the cross protection ofApplied and environmental microbiology · 2025
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  12. Interactive effects of COJournal of phycology · 2025
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  16. Seasonal blooms ofFrontiers in microbiology · 2025
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  17. Article
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  19. Ploidy levels in diverse picocyanobacteria from the Baltic Sea.Environmental microbiology reports · 2024
    Article
  20. Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jill A SohmDepartment of Biological Sciences, University of Southern California, Los Angeles, CA, USA.
Nathan A AhlgrenDepartment of Biological Sciences, University of Southern California, Los Angeles, CA, USA.
Zachary J ThomsonSchool of Oceanography, University of Washington, Seattle, WA, USA.
Cheryl WilliamsSchool of Oceanography, University of Washington, Seattle, WA, USA.
James W MoffettDepartment of Biological Sciences, University of Southern California, Los Angeles, CA, USA.
Mak A SaitoMarine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, MA, USA.
Eric A WebbDepartment of Biological Sciences, University of Southern California, Los Angeles, CA, USA.
Gabrielle RocapSchool of Oceanography, University of Washington, Seattle, WA, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Marine picocyanobacteria, comprised of the genera Synechococcus and Prochlorococcus, are the most abundant and widespread primary producers in the ocean. More than 20 genetically distinct clades of marine Synechococcus have been identified, but their physiology and biogeography are not as thoroughly characterized as those of Prochlorococcus. Using clade-specific qPCR primers, we measured the abundance of 10 Synechococcus clades at 92 locations in surface waters of the Atlantic and Pacific Oceans. We found that Synechococcus partition the ocean into four distinct regimes distinguished by temperature, macronutrients and iron availability. Clades I and IV were prevalent in colder, mesotrophic waters; clades II, III and X dominated in the warm, oligotrophic open ocean; clades CRD1 and CRD2 were restricted to sites with low iron availability; and clades XV and XVI were only found in transitional waters at the edges of the other biomes. Overall, clade II was the most ubiquitous clade investigated and was the dominant clade in the largest biome, the oligotrophic open ocean. Co-occurring clades that occupy the same regime belong to distinct evolutionary lineages within Synechococcus, indicating that multiple ecotypes have evolved independently to occupy similar niches and represent examples of parallel evolution. We speculate that parallel evolution of ecotypes may be a common feature of diverse marine microbial communities that contributes to functional redundancy and the potential for resiliency.

Indexed as

DNA PrimersEcotypeIronOceans and SeasPacific OceanPhylogenyProchlorococcusSeawaterSynechococcusTemperatureDNA PrimersIron

Identifiers

PMID26208139
PMCPMC4737926

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.