Evidence map›Paper›PMID 26206939›Full record

ReviewScience (New York, N.Y.)2015

HUMAN MICROBIOTA. Small molecules from the human microbiota.

Mohamed S Donia, Michael A Fischbach

Open access · greenAbstract readReview
In one paragraph

Review in Science (New York, N.Y.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 430 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
430citing papers in PubMed, 1 pooled it
27.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

430 citing papers in PubMed, 1 synthesis or guideline pooled it, 761 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. From predicted bacteriocins to ecological function.Current research in microbial sciences · 2026
    Review
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  19. Gut microbe-derivedProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
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370 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Mohamed S DoniaDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544, USA. donia@princeton.edu fischbach@fischbachgroup.org.
Michael A FischbachDepartment of Bioengineering and Therapeutic Sciences and the California Institute for Quantitative Biosciences, University of California, San Francisco, San Francisco, CA 94158, USA. donia@princeton.edu fischbach@fischbachgroup.org.
Princeton University · USUniversity of California, San Francisco · US

Funding

Rewiring Therapeutic Cells: User-Controlled T Cells and Stem CellsP50GM081879 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI LIM, WENDELL A · 2010 to 2017
$19.0M
Dietary and Microbial Reprogramming of Intestinal Microbiota-Produced MetabolitesR01DK101674 · NIDDK · STANFORD UNIVERSITY · PI FISCHBACH, MICHAEL ANDREW, MEYER, TIMOTHY W · 2014 to 2024
$6.5M
Antibiotics from nose and throat commensals that impact pathogen colonizationR01AI101018 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI FISCHBACH, MICHAEL ANDREW, LEMON, KATHERINE PAIGE · 2012 to 2021
$4.4M
Identifying and characterizing small molecules from the human microbiomeDP2OD007290 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FISCHBACH, MICHAEL ANDREW · 2010 to 2010
$2.3M
NIAID NIH HHS AI101018NIAID NIH HHS R01 AI101018NIDDK NIH HHS DK101674NIDDK NIH HHS R01 DK101674NIGMS NIH HHS GM081879NIGMS NIH HHS P50 GM081879NIH HHS DP2 OD007290NIH HHS OD007290
6 · The paper itself

Abstract

Developments in the use of genomics to guide natural product discovery and a recent emphasis on understanding the molecular mechanisms of microbiota-host interactions have converged on the discovery of small molecules from the human microbiome. Here, we review what is known about small molecules produced by the human microbiota. Numerous molecules representing each of the major metabolite classes have been found that have a variety of biological activities, including immune modulation and antibiosis. We discuss technologies that will affect how microbiota-derived molecules are discovered in the future and consider the challenges inherent in finding specific molecules that are critical for driving microbe-host and microbe-microbe interactions and understanding their biological relevance.

Indexed as

Biological ProductsMicrobiotaAntibiosisBacteriocinsEnterotoxinsGlycolipidsHumansImmunomodulationOligosaccharidesPeptidesProtein Processing, Post-TranslationalRibosomesTerpenesBacteriocinsBiological ProductsEnterotoxinsGlycolipidsOligosaccharidesPeptidesTerpenes

Identifiers

PMID26206939
PMCPMC4641445
OpenAlexW1715339469

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.