Evidence map›Paper›PMID 26206852›Full record

ArticlePlant physiology2015

Pseudomonas syringae Effector Avirulence Protein E Localizes to the Host Plasma Membrane and Down-Regulates the Expression of the NONRACE-SPECIFIC DISEASE RESISTANCE1/HARPIN-INDUCED1-LIKE13 Gene Required for Antibacterial Immunity in Arabidopsis.

Xiu-Fang Xin, Kinya Nomura, Xinhua Ding, Xujun Chen, Kun Wang, Kyaw Aung, Francisco Uribe, Bruce Rosa, Jian Yao, Jin Chen and 1 more

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
6.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 64 citations in OpenAlex.

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  13. A PDLP-NHL3 complex integrates plasmodesmal immune signaling cascades.Proceedings of the National Academy of Sciences of the United States of America · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Xiu-Fang XinDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Kinya NomuraDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Xinhua DingDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Xujun ChenDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Kun WangDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Kyaw AungDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Francisco UribeDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).ORCID http://orcid.org/0000-0002-3922-6328
Bruce RosaDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Jian YaoDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Jin ChenDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.).
Sheng Yang HeDepartment of Energy Plant Research Laboratory (X.-F.X., K.N., X.D., X.C., K.A., F.U., B.R., J.Y., J.C., S.Y.H.), Department of Plant Biology (X.-F.X.), Department of Biochemistry and Molecular Biology (K.W.), and Howard Hughes Medical Institute (S.Y.H.), Michigan State University, East Lansing, Michigan 48824;State Key Laboratory of Crop Biology, Shandong Provincial Key Laboratory of Agricultural Microbiology, Shandong Agricultural University, Tai'an, 271018 Shandong, China (X.D.);Key Laboratory of Plant Pathology, Department of Plant Pathology, China Agricultural University, Beijing 100193, China (X.C.);Genome Institute, Washington University, St. Louis, Missouri 63108 (B.R.); andDepartment of Biological Sciences, Western Michigan University, Kalamazoo, Michigan 49008 (J.Y.) hes@msu.edu.ORCID http://orcid.org/0000-0003-1308-498X
Xuzhou Medical College · CNHoward Hughes Medical Institute · USWestern Michigan University · US

Funding

Arabidopsis basal innate immunity to bacterial infectionR01AI060761 · NIAID · MICHIGAN STATE UNIVERSITY · PI HE, SHENG YANG · 2006 to 2010
$1.8M
Innate immunity-associated recycling endosome in Arabidopsis and pathogen attackR01GM109928 · NIGMS · MICHIGAN STATE UNIVERSITY · PI HE, SHENG YANG · 2015 to 2018
$1.1M
Arabidopsis basil immunity to human and plant pathogensR21AI060761 · NIAID · MICHIGAN STATE UNIVERSITY · PI HE, SHENG YANG · 2004 to 2004
$378k
Manipulation of Host Immunity by Bacterial Effectors in ArabidopsisR56AI060761 · NIAID · MICHIGAN STATE UNIVERSITY · PI HE, SHENG YANG · 2011 to 2011
$374k
NIAID NIH HHS AI060761NIAID NIH HHS R01 AI060761NIAID NIH HHS R21 AI060761NIAID NIH HHS R56 AI060761NIGMS NIH HHS GM109928NIGMS NIH HHS R01 GM109928
6 · The paper itself

Abstract

Many bacterial pathogens of plants and animals deliver effector proteins into host cells to promote infection. Elucidation of how pathogen effector proteins function not only is critical for understanding bacterial pathogenesis but also provides a useful tool in discovering the functions of host genes. In this study, we characterized the Pseudomonas syringae pv tomato DC3000 effector protein Avirulence Protein E (AvrE), the founding member of a widely distributed, yet functionally enigmatic, bacterial effector family. We show that AvrE is localized in the plasma membrane (PM) and PM-associated vesicle-like structures in the plant cell. AvrE contains two physically interacting domains, and the amino-terminal portion contains a PM-localization signal. Genome-wide microarray analysis indicates that AvrE, as well as the functionally redundant effector Hypersensitive response and pathogenicity-dependent Outer Protein M1, down-regulates the expression of the NONRACE-SPECIFIC DISEASE RESISTANCE1/HARPIN-INDUCED1-LIKE13 (NHL13) gene in Arabidopsis (Arabidopsis thaliana). Mutational analysis shows that NHL13 is required for plant immunity, as the nhl13 mutant plant displayed enhanced disease susceptibility. Our results defined the action site of one of the most important bacterial virulence proteins in plants and the antibacterial immunity function of the NHL13 gene.

Indexed as

Down-RegulationPlant ImmunityAnti-Bacterial AgentsArabidopsisArabidopsis ProteinsBacterial ProteinsCell MembraneGenes, PlantPlant LeavesPlants, Genetically ModifiedProtein Structure, TertiaryProtein TransportPseudomonas syringaeSequence DeletionVirulenceAnti-Bacterial AgentsArabidopsis ProteinsAvrE protein, Pseudomonas syringaeBacterial Proteins

Identifiers

PMID26206852
PMCPMC4577396
OpenAlexW2128781093

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.