Evidence map›Paper›PMID 26206584›Full record

ArticleThe EMBO journal2015

Cell cycle-dependent ubiquitylation and destruction of NDE1 by CDK5-FBW7 regulates ciliary length.

Dipak Maskey, Matthew Caleb Marlin, Seokho Kim, Sehyun Kim, E-Ching Ong, Guangpu Li, Leonidas Tsiokas

Open access · bronzeAbstract read
In one paragraph

Article in The EMBO journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 78 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Nde1 and Ndel1: Outstanding Mysteries in Dynein-Mediated Transport.Frontiers in cell and developmental biology · 2022
    Review
  14. Article
  15. SCFThe EMBO journal · 2021
    Article
  16. Article
  17. Moonlighting of mitotic regulators in cilium disassembly.Cellular and molecular life sciences : CMLS · 2021
    Review
  18. Exploring the Spectrum of Kidney Ciliopathies.Diagnostics (Basel, Switzerland) · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Dipak MaskeyDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Matthew Caleb MarlinDepartment of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Seokho KimDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Sehyun KimDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
E-Ching OngDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Guangpu LiDepartment of Biochemistry and Molecular Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA.
Leonidas TsiokasDepartment of Cell Biology, University of Oklahoma Health Sciences Center, Oklahoma City, OK, USA ltsiokas@ouhsc.edu.
University of Oklahoma Health Sciences Center · US

Funding

Regulation of Ca++ signaling by the PDK 2 gene productR01DK059599 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI TSIOKAS, LEONIDAS · 2002 to 2020
$4.2M
Structural and Functional Specificity of Rab GTPasesR01GM074692 · NIGMS · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI LI, GUANGPU · 2006 to 2015
$2.4M
Regulation of calcium signaling by the PKD2 gene productR56DK059599 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI TSIOKAS, LEONIDAS · 2010 to 2010
$178k
NIDDK NIH HHS DK59599NIDDK NIH HHS R01 DK059599NIDDK NIH HHS R56 DK059599NIGMS NIH HHS GM074692NIGMS NIH HHS R01 GM074692
6 · The paper itself

Abstract

Primary cilia start forming within the G1 phase of the cell cycle and continue to grow as cells exit the cell cycle (G0). They start resorbing when cells re-enter the cell cycle (S phase) and are practically invisible in mitosis. The mechanisms by which cilium biogenesis and disassembly are coupled to the cell cycle are complex and not well understood. We previously identified the centrosomal phosphoprotein NDE1 as a negative regulator of ciliary length and showed that its levels inversely correlate with ciliogenesis. Here, we identify the tumor suppressor FBW7 (also known as FBXW7, CDC4, AGO, or SEL-10) as the E3 ligase that mediates the destruction of NDE1 upon entry into G1. CDK5, a kinase active in G1/G0, primes NDE1 for FBW7-mediated recognition. Cells depleted of FBW7 or CDK5 show enhanced levels of NDE1 and a reduction in ciliary length, which is corrected in cells depleted of both FBW7 or CDK5 and NDE1. These data show that cell cycle-dependent mechanisms can control ciliary length through a CDK5-FBW7-NDE1 pathway.

Indexed as

ProteolysisAnimalsBALB 3T3 CellsCell CycleCell Cycle ProteinsCiliaCyclin-Dependent Kinase 5F-Box ProteinsF-Box-WD Repeat-Containing Protein 7HEK293 CellsHumansMiceMicrotubule-Associated ProteinsSignal TransductionUbiquitinationUbiquitin-Protein LigasesCDK5 protein, humanCdk5 protein, mouseCell Cycle ProteinsCyclin-Dependent Kinase 5F-Box ProteinsF-Box-WD Repeat-Containing Protein 7FBXW7 protein, humanFbxw7 protein, mouseMicrotubule-Associated ProteinsNde1 protein, humanNde1 protein, mouseUbiquitin-Protein LigasesCDK5ciliaFBW7NDE1p35

Identifiers

PMID26206584
PMCPMC4601663
OpenAlexW2160014395

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.