Evidence map›Paper›PMID 26206143›Full record

ArticleMalaria journal2015

Absence of correlation between ex vivo susceptibility to doxycycline and pfteQ-pfmdt gene polymorphism in French Guiana.

Marie Mura, Sébastien Briolant, Damien Donato, Béatrice Volney, Stéphane Pelleau, Lise Musset, Eric Legrand

Open access · goldAbstract read
In one paragraph

Article in Malaria journal, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Tetracyclines in malaria.Malaria journal · 2015
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Marie MuraLaboratoire de Parasitologie, Centre National de Référence du Paludisme aux Antilles, Guyane, Institut Pasteur de la Guyane, Cayenne Cedex, France. mariemura@yahoo.fr.
Sébastien BriolantLaboratoire de Parasitologie, Centre National de Référence du Paludisme aux Antilles, Guyane, Institut Pasteur de la Guyane, Cayenne Cedex, France. sbriolant@pasteur-cayenne.fr.
Damien DonatoLaboratoire de Parasitologie, Centre National de Référence du Paludisme aux Antilles, Guyane, Institut Pasteur de la Guyane, Cayenne Cedex, France. ddonato@pasteur-cayenne.fr.
Béatrice VolneyLaboratoire de Parasitologie, Centre National de Référence du Paludisme aux Antilles, Guyane, Institut Pasteur de la Guyane, Cayenne Cedex, France. bvolney@pasteur-cayenne.fr.
Stéphane PelleauLaboratoire de Parasitologie, Centre National de Référence du Paludisme aux Antilles, Guyane, Institut Pasteur de la Guyane, Cayenne Cedex, France. spelleau@pasteur-cayenne.fr.
Lise MussetLaboratoire de Parasitologie, Centre National de Référence du Paludisme aux Antilles, Guyane, Institut Pasteur de la Guyane, Cayenne Cedex, France. lmusset@pasteur-cayenne.fr.
Eric LegrandLaboratoire de Parasitologie, Centre National de Référence du Paludisme aux Antilles, Guyane, Institut Pasteur de la Guyane, Cayenne Cedex, France. eric.legrand@pasteur.fr.
Institut Pasteur de la Guyane · GFInstitut Pasteur · FRUniversity of French Guiana · GF

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn French Guiana, doxycycline is used for both chemoprophylaxis and the treatment of malaria. The presence of isolates with reduced ex vivo susceptibility to doxycycline in French Guiana makes it critical to identify any genetic determinants contributing to the chemosusceptibility level of Plasmodium falciparum to doxycycline, such as pfmdt and pftetQ, which were recently identified as potential molecular markers in African isolates.

methodsA Bayesian statistical approach was used to define different ex vivo doxycycline phenotypes. The pfmdt and pftetQ gene copy numbers were quantified by quantitative real-time polymerase chain reaction in 129 P. falciparum isolates collected between 2000 and 2010, and pftetQ, pfrps7, pfssurRNA, and pflsurRNA sequences were analysed after amplification by polymerase chain reaction.

resultsPftetQ and pfmdt copy numbers were not associated with reduced susceptibility to doxycycline in P. falciparum within French Guiana. Sequence analysis of the genes revealed five known single nucleotide polymorphisms. Three new SNPs were identified in the apicoplast ribosomal RNA long sub-unit (pflsurRNA): C740T, A1875C and A1875T. These polymorphisms were not associated with reduced chemosusceptibility to doxycycline.

conclusionsThe present study does not validate pfmdt and pftetQ genes as molecular markers of decreased susceptibility to doxycycline in P. falciparum isolates in French Guiana.

Indexed as

Drug ResistancePolymorphism, GeneticAntimalarialsBayes TheoremDoxycyclineFrench GuianaGene DosageGenetic MarkersParasitic Sensitivity TestsPlasmodium falciparumPolymorphism, Single NucleotideProtozoan ProteinsReal-Time Polymerase Chain ReactionAntimalarialsDoxycyclineGenetic MarkersProtozoan Proteins

Identifiers

PMID26206143
PMCPMC4513625
OpenAlexW1501047691

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.