Evidence map›Paper›PMID 26204840›Full record

ArticleInternational journal of molecular sciences2015

Characterization of a Functional Role of the Bradyrhizobium japonicum Isocitrate Lyase in Desiccation Tolerance.

Jeong-Min Jeon, Hae-In Lee, Michael J Sadowsky, Masayuki Sugawara, Woo-Suk Chang

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.6field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. DesertPlants (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Jeong-Min JeonDepartment of Biology, University of Texas, Arlington, TX 76019, USA. jeongm@uta.edu.
Hae-In LeeDepartment of Biology, University of Texas, Arlington, TX 76019, USA. hilee@uta.edu.
Michael J SadowskyDepartment of Soil, Water & Climate, and The BioTechnology Institute, University of Minnesota, St. Paul, MN 55108, USA. msugawara@ige.tohoku.ac.jp.
Masayuki SugawaraDepartment of Soil, Water & Climate, and The BioTechnology Institute, University of Minnesota, St. Paul, MN 55108, USA. msugawara@ige.tohoku.ac.jp.
Woo-Suk ChangDepartment of Biology, University of Texas, Arlington, TX 76019, USA. wschang@uta.edu.
The University of Texas at Arlington · USBiotechnology Institute · USUniversity of Minnesota · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bradyrhizobium japonicum is a nitrogen-fixing symbiont of soybean. In previous studies, transcriptomic profiling of B. japonicum USDA110, grown under various environmental conditions, revealed the highly induced gene aceA, encoding isocitrate lyase (ICL). The ICL catalyzes the conversion of isocitrate to succinate and glyoxylate in the glyoxylate bypass of the TCA cycle. Here, we evaluated the functional role of B. japonicum ICL under desiccation-induced stress conditions. We purified AceA (molecular mass = 65 kDa) from B. japonicum USDA110, using a His-tag and Ni-NTA column approach, and confirmed its ICL enzyme activity. The aceA mutant showed higher sensitivity to desiccation stress (27% relative humidity (RH)), compared to the wild type. ICL activity of the wild type strain increased approximately 2.5-fold upon exposure to 27% RH for 24 h. The aceA mutant also showed an increased susceptibility to salt stress. Gene expression analysis of aceA using qRT-PCR revealed a 148-fold induction by desiccation, while other genes involved in the glyoxylate pathway were not differentially expressed in this condition. Transcriptome analyses revealed that stress-related genes, such as chaperones, were upregulated in the wild-type under desiccating conditions, even though fold induction was not dramatic (ca. 1.5-2.5-fold).

Indexed as

Stress, PhysiologicalBacterial ProteinsBradyrhizobiumDesiccationIsocitrate LyaseTranscriptomeBacterial ProteinsIsocitrate LyaseaceABradyrhizobium japonicumdesiccation stressisocitrate lyase (ICL)symbiotic nitrogen fixation

Identifiers

PMID26204840
PMCPMC4519974
OpenAlexW2146687736

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.