Evidence map›Paper›PMID 26204838›Full record

ArticleInternational journal of molecular sciences2015

Structural Variation (SV) Markers in the Basidiomycete Volvariella volvacea and Their Application in the Construction of a Genetic Map.

Wei Wang, Bingzhi Chen, Lei Zhang, Junjie Yan, Yuanping Lu, Xiaoyin Zhang, Yuji Jiang, Taju Wu, Arend Frans van Peer, Shaojie Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Wei WangMycological Research Center, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. uniwangwei@163.com.
Bingzhi ChenMycological Research Center, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. cbz_2006@163.com.
Lei ZhangMycological Research Center, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. zhanglei311540@163.com.
Junjie YanMycological Research Center, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. junjie017@163.com.
Yuanping LuMycological Research Center, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. yuanplu1106@163.com.
Xiaoyin ZhangMycological Research Center, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. xyzhang8801@sina.com.
Yuji JiangCollege of Food Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. jyj1209@163.com.
Taju WuState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China. wutaju@163.com.
Arend Frans van PeerMycological Research Center, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. arendvanpeer@gmail.com.
Shaojie LiState Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China. lisj@im.ac.cn.
Baogui XieMycological Research Center, College of Life Sciences, Fujian Agriculture and Forestry University, Fuzhou 350002, China. mrcfafu@163.com.
Fujian Agriculture and Forestry University · CNInstitute of Software · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Molecular markers and genetic maps are useful tools in genetic studies. Novel molecular markers and their applications have been developed in recent years. With the recent advancements in sequencing technology, the genomic sequences of an increasingly great number of fungi have become available. A novel type of molecular marker was developed to construct the first reported linkage map of the edible and economically important basidiomycete Volvariella volvacea by using 104 structural variation (SV) markers that are based on the genomic sequences. Because of the special and simple life cycle in basidiomycete, SV markers can be effectively developed by genomic comparison and tested in single spore isolates (SSIs). This stable, convenient and rapidly developed marker may assist in the construction of genetic maps and facilitate genomic research for other species of fungi.

Indexed as

Genetic LinkageGenome, FungalGenomic Structural VariationBase SequenceGenetic MarkersMolecular Sequence DataVolvariellaGenetic Markersgenome re-sequencinglinkage mapSV markerVolvariella volvacea

Identifiers

PMID26204838
PMCPMC4519972
OpenAlexW1501716275

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.