Evidence map›Paper›PMID 26203822›Full record

ArticleNature protocols2015

Superresolution live imaging of plant cells using structured illumination microscopy.

George Komis, Martin Mistrik, Olga Šamajová, Miroslav Ovečka, Jiri Bartek, Jozef Šamaj

Abstract read
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In one paragraph

Article in Nature protocols, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
12.4field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 70 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Fluorescent Fusion Protein Expression in Plant Cells.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  7. Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Imaging tools for plant nanobiotechnology.Frontiers in genome editing · 2022
    Review
  13. Article
  14. Article
  15. Review
  16. From Microscopy to Nanoscopy: Defining anFrontiers in plant science · 2021
    Review
  17. Article
  18. Review
  19. Article
  20. Arabinogalactan protein-rare earth element complexes activate plant endocytosis.Proceedings of the National Academy of Sciences of the United States of America · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

George KomisCentre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic.
Martin MistrikInstitute of Molecular and Translational Medicine, Palacký University, Olomouc, Czech Republic.
Olga ŠamajováCentre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic.
Miroslav OvečkaCentre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic.
Jiri Bartek1] Institute of Molecular and Translational Medicine, Palacký University, Olomouc, Czech Republic. [2] Genome Integrity Unit, Danish Cancer Society Research Center, Copenhagen, Denmark.
Jozef ŠamajCentre of the Region Haná for Biotechnological and Agricultural Research, Palacký University, Olomouc, Czech Republic.
Palacký University Olomouc · CZInstitute of Molecular and Translational Medicine · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although superresolution (SR) approaches have been routinely used for fixed or living material from other organisms, the use of time-lapse structured illumination microscopy (SIM) imaging in plant cells still remains under-developed. Here we describe a validated method for time-lapse SIM that focuses on cortical microtubules of different plant cell types. By using one of the existing commercially available SIM platforms, we provide a user-friendly and easy-to-follow protocol that may be widely applied to the imaging of plant cells. This protocol includes steps describing calibration of the microscope and channel alignment, generation of an experimental point spread function (PSF), preparation of appropriate observation chambers with available plant material, image acquisition, reconstruction and validation. This protocol can be carried out within two to three working days.

Indexed as

Plant CellsArabidopsisIntravital Microscopy

Identifiers

PMID26203822
OpenAlexW984181354

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.