Evidence map›Paper›PMID 26203426›Full record

ArticleIMA fungus2015

IMA Genome-F 4: Draft genome sequences of Chrysoporthe austroafricana, Diplodia scrobiculata, Fusarium nygamai, Leptographium lundbergii, Limonomyces culmigenus, Stagonosporopsis tanaceti, and Thielaviopsis punctulata.

Brenda D Wingfield, Peter K Ades, Fatima A Al-Naemi, Lisa A Beirn, Wubetu Bihon, Jo Anne Crouch, Z Wilhelm de Beer, Lieschen De Vos, Tuan A Duong, Christopher J Fields and 14 more

Abstract read
In one paragraph

Article in IMA fungus, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed.

  1. Fusarium Genome Sequencing and Assembly.Methods in molecular biology (Clifton, N.J.) · 2025
    Article
  2. Article
  3. Article
  4. In Silico Characterization of the Secretome of the Fungal PathogenJournal of fungi (Basel, Switzerland) · 2023
    Article
  5. Generic boundaries in theStudies in mycology · 2022
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. The Mitogenomes ofFrontiers in microbiology · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Brenda D WingfieldDepartment of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa;
Peter K AdesDepartment of Forest and Ecosystem Science, The University of Melbourne, Victoria, 3010, Australia.
Fatima A Al-NaemiDepartment of Biological and Environmental Sciences, College of Arts and Sciences, Qatar University, Doha, Qatar.
Lisa A BeirnDepartment of Plant Biology and Pathology, Rutgers University, 59 Dudley Road, New Brunswick, NJ 08901, USA.
Wubetu BihonDepartment of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. bag x20, Pretoria 0028, South Africa ; Agricultural Research Council, Vegetable and Ornamental Plant Institute, P. Bag X293, Pretoria 0001, South Africa.
Jo Anne CrouchSystematic Mycology and Microbiology Laboratory, U.S. Department of Agriculture (USDA), Agricultural Research Service (ARS), Beltsville, MD 20705, USA.
Z Wilhelm de BeerDepartment of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. bag x20, Pretoria 0028, South Africa.
Lieschen De VosDepartment of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa;
Tuan A DuongDepartment of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa;
Christopher J FieldsHigh Performance Biological Computing Group, Roy J. Carver Biotechnology Center/W.M. Keck Center, University of Illinois at Urbana-Champaign, IL, USA.
Gerda FourieDepartment of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. bag x20, Pretoria 0028, South Africa.
Aquillah M KanziDepartment of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa;
Martha Malapi-WightSystematic Mycology and Microbiology Laboratory, U.S. Department of Agriculture (USDA), Agricultural Research Service (ARS), Beltsville, MD 20705, USA.
Sarah J PethybridgeSchool of Integrative Plant Sciences, Plant Pathology & Plant-Microbe Biology Section, Cornell University, Geneva, NY, 14456, USA.
Osman RadwanDepartment of Natural Resources and Environmental Sciences, University of Illinois at Urbana-Champaign, IL, USA and Department of Plant Production, College of Technology, Zagazig University, Sharkia, Egypt.
Gloria RendonHigh Performance Biological Computing Group, Roy J. Carver Biotechnology Center/W.M. Keck Center, University of Illinois at Urbana-Champaign, IL, USA.
Bernard SlippersDepartment of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa;
Quentin C SantanaDepartment of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa;
Emma T SteenkampDepartment of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. bag x20, Pretoria 0028, South Africa.
Paul W J TaylorFaculty of Veterinary and Agricultural Sciences, The University of Melbourne, Victoria, 3010, Australia.
Niloofar VaghefiSchool of Integrative Plant Sciences, Plant Pathology & Plant-Microbe Biology Section, Cornell University, Geneva, NY, 14456, USA.
Nicolaas A van der MerweDepartment of Genetics, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. Bag X20, Pretoria 0028, South Africa;
Daniel VeltriSystematic Mycology and Microbiology Laboratory, U.S. Department of Agriculture (USDA), Agricultural Research Service (ARS), Beltsville, MD 20705, USA ; Oak Ridge Laboratories ARS Research Participation Program, USDA-ARS, Beltsville, MD 20705, USA.
Michael J WingfieldDepartment of Microbiology and Plant Pathology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, P. bag x20, Pretoria 0028, South Africa.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genomes of Chrysoporthe austroafricana, Diplodia scrobiculata, Fusarium nygami, Leptographium lundbergii, Limonomyces culmigenus, Stagonosporopsis tanaceti, and Thielaviopsis punctulata are presented in this genome announcement. These seven genomes are from endophytes, plant pathogens and economically important fungal species. The genome sizes range from 26.6 Mb in the case of Leptographium lundbergii to 44 Mb for Chrysoporthe austroafricana. The availability of these genome data will provide opportunities to resolve longstanding questions regarding the taxonomy of species in these genera, and may contribute to our understanding of the lifestyles through comparative studies with closely related organisms.

Indexed as

basal stalk and root rotblack scorch diseaseblue staincanker pathogenpink patch diseaseray blight

Identifiers

PMID26203426
PMCPMC4500086

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.