Evidence map›Paper›PMID 26202239›Full record

ArticleJournal of virology2015

Transmission of H7N9 Influenza Viruses with a Polymorphism at PB2 Residue 627 in Chickens and Ferrets.

Geraldine S M Luk, Connie Y H Leung, Sin Fun Sia, Ka-Tim Choy, Jie Zhou, Candy C K Ho, Peter P H Cheung, Elaine F Lee, Chris K L Wai, Pamela C H Li and 5 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of virology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 54 citations in OpenAlex.

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  15. H7N9 Influenza Virus in China.Cold Spring Harbor perspectives in medicine · 2021
    Review
  16. Dynamic PB2-E627K substitution of influenza H7N9 virus indicates the in vivo genetic tuning and rapid host adaptation.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 3 countries.

Geraldine S M LukAgriculture, Fisheries and Conservation Department, The Government of Hong Kong SAR, Hong Kong.
Connie Y H LeungSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Sin Fun SiaSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Ka-Tim ChoySchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Jie ZhouSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Candy C K HoSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Peter P H CheungSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
Elaine F LeeAgriculture, Fisheries and Conservation Department, The Government of Hong Kong SAR, Hong Kong.
Chris K L WaiAgriculture, Fisheries and Conservation Department, The Government of Hong Kong SAR, Hong Kong.
Pamela C H LiAgriculture, Fisheries and Conservation Department, The Government of Hong Kong SAR, Hong Kong.
Sin-Ming IpAgriculture, Fisheries and Conservation Department, The Government of Hong Kong SAR, Hong Kong.
Leo L M PoonSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong.
William G LindsleyAllergy and Clinical Immunology Branch, Health Effects Laboratory Division, National Institute for Occupational Safety and Health, Morgantown, West Virginia, USA.
Malik PeirisSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong malik@hkucc.hku.hk hyen@hku.hk.
Hui-Ling YenSchool of Public Health, LKS Faculty of Medicine, The University of Hong Kong, Hong Kong malik@hkucc.hku.hk hyen@hku.hk.ORCID http://orcid.org/0000-0003-2493-3609
University of Hong Kong · HKAgriculture Fisheries and Conservation Department · CNNational Institute for Occupational Safety and Health · US

Funding

NIAID NIH HHS HHSN272201400006CPHS HHS HHSN272201400006C
6 · The paper itself

Abstract

unlabelledPoultry exposure is a major risk factor for human H7N9 zoonotic infections, for which the mode of transmission remains unclear. We studied the transmission of genetically related poultry and human H7N9 influenza viruses differing by four amino acids, including the host determinant PB2 residue 627. A/Silkie chicken/HK/1772/2014 (SCk1772) and A/HK/3263/14 (HK3263) replicated to comparable titers in chickens, with superior oropharyngeal over cloacal shedding; both viruses transmitted efficiently among chickens via direct contact but inefficiently via the airborne route. Interspecies transmission via the airborne route was observed for ferrets exposed to the SCk1772- or HK3263-infected chickens, while low numbers of copies of influenza viral genome were detected in the air, predominantly at particle sizes larger than 4 μm. In ferrets, the human isolate HK3263 replicated to higher titers and transmitted more efficiently via direct contact than SCk1772. We monitored "intrahost" and "interhost" adaptive changes at PB2 residue 627 during infection and transmission of the Sck1772 that carried E627 and HK3263 that carried V/K/E polymorphism at 60%, 20%, and 20%, respectively. For SCk1772, positive selection for K627 over E627 was observed in ferrets during the chicken-to-ferret or ferret-to-ferret transmission. For HK3263 that contained V/K/E polymorphism, mixed V627 and E627 genotypes were transmitted among chickens while either V627 or K627 was transmitted to ferrets with a narrow transmission bottleneck. Overall, our results suggest direct contact as the main mode for H7N9 transmission and identify the PB2-V627 genotype with uncompromised fitness and transmissibility in both avian and mammalian species. IMPORTANCE: We studied the modes of H7N9 transmission, as this information is crucial for developing effective control measures for prevention. Using chicken (SCk1772) and human (HK3263) H7N9 isolates that differed by four amino acids, including the host determinant PB2 residue 627, we observed that both viruses transmitted efficiently among chickens via direct contact but inefficiently via the airborne route. Chicken-to-ferret transmission via the airborne route was observed, along with the detection of viral genome in the air at low copy numbers. In ferrets, HK3263 transmitted more efficiently than SCk1772 via direct contact. During the transmission of SCk1772 that contained E and HK3263 that contained V/K/E polymorphism at PB2 residue 627, positive selections of E627 and K627 were observed in chickens and ferrets, respectively. In addition, PB2-V627 was transmitted and stably maintained in both avian and mammalian species. Our results support applying intervention strategies that minimize direct and indirect contact at the poultry markets during epidemics.

Indexed as

Polymorphism, GeneticAir MicrobiologyAnimalsChickensFerretsGenome, ViralHost-Pathogen InteractionsHumansInfluenza A Virus, H7N9 SubtypeInfluenza, HumanInfluenza in BirdsOrthomyxoviridae InfectionsPoultry DiseasesRNA-Dependent RNA PolymeraseRNA, ViralSpecies SpecificityPB2 protein, Influenzavirus ARNA-Dependent RNA PolymeraseRNA, ViralViral Proteins

Identifiers

PMID26202239
PMCPMC4577900
OpenAlexW1929098447

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.