Evidence map›Paper›PMID 26202015›Full record

ArticleScientific reports2015

New "haploid biofilm model" unravels IRA2 as a novel regulator of Candida albicans biofilm formation.

Chaminda Jayampath Seneviratne, Guisheng Zeng, Thuyen Truong, Sarah Sze, Wah Wong, Lakshman Samaranayake, Fong Yee Chan, Yan-Ming Wang, Haitao Wang, Jiaxin Gao and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
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  6. The Proteome of Community LivingMicroorganisms · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Use of Haploid Model ofFrontiers in cellular and infection microbiology · 2018
    Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Chaminda Jayampath SeneviratneOral Sciences, Faculty of Dentistry, National University of Singapore.
Guisheng ZengInstitute of Molecular &Cell Biology, Agency for Science, Technology and Research, Proteos, Singapore.
Thuyen TruongOral Sciences, Faculty of Dentistry, National University of Singapore.
Sarah SzeOral Sciences, Faculty of Dentistry, National University of Singapore.
Wah WongFaculty of Dentistry, The University of Hong Kong, Hong Kong.
Lakshman Samaranayake1] Faculty of Dentistry, The University of Hong Kong, Hong Kong [2] School of Dentistry, Queensland University, Australia.
Fong Yee ChanInstitute of Molecular &Cell Biology, Agency for Science, Technology and Research, Proteos, Singapore.
Yan-Ming WangInstitute of Molecular &Cell Biology, Agency for Science, Technology and Research, Proteos, Singapore.
Haitao WangInstitute of Molecular &Cell Biology, Agency for Science, Technology and Research, Proteos, Singapore.
Jiaxin GaoInstitute of Molecular &Cell Biology, Agency for Science, Technology and Research, Proteos, Singapore.
Yue Wang1] Institute of Molecular &Cell Biology, Agency for Science, Technology and Research, Proteos, Singapore [2] Department of Biochemistry, Yong Loo Lin School of Medicine, National University of Singapore, Singapore.
National University of Singapore · SGInstitute of Molecular and Cell Biology · SGAgency for Science, Technology and Research · SGUniversity of Hong Kong · HK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Clinical isolates of the fungal human pathogen Candida albicans are invariably diploid and heterozygous, impeding genetic study. Recent isolation of C. albicans haploids opens opportunities to apply technologies unfeasible in diploids. However, doubts remain on whether the haploids, derived from chromosome loss, can represent the diploids. Here, we use C. albicans haploids to investigate biofilm, a key virulence attribute. We conducted the first comprehensive characterization of biofilm formation of the haploids in comparison with the diploids. We demonstrate that the haploids form biofilms with essentially the same characteristics as the diploids. Screening a haploid mutant library has uncovered novel GTPase-related genes as biofilm regulators, including IRA2 that encodes an activator of the Ras GTPase. IRA2-deletion mutants develop poorly constructed biofilm in both haploid and diploid C. albicans. Our results demonstrate that the haploids are a valid model for C. albicans biofilm research and a powerful tool for uncovering novel regulators.

Indexed as

HaploidyBiofilmsCandida albicansCell ProliferationGTPase-Activating ProteinsSaccharomyces cerevisiae ProteinsSpecies SpecificityGTPase-Activating ProteinsIRA2 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID26202015
PMCPMC5378891
OpenAlexW1844674415

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.