Evidence map›Paper›PMID 26200614›Full record

ArticleMedicine2015

Molecular Analyses Define Vα7.2-Jα33+ MAIT Cell Depletion in HIV Infection: A Case-Control Study.

James E Ussher, Prabhjeet Phalora, Cormac Cosgrove, Rachel F Hannaway, Andri Rauch, Huldrych F Günthard, Philip Goulder, Rodney E Phillips, Christian B Willberg, Paul Klenerman

Open access · goldAbstract read
In one paragraph

Article in Medicine, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Mucosal-associated invariant T cells and Vδ2Clinical and experimental immunology · 2020
    Trial
  2. Trial
  3. Gastrointestinal MAIT cells in chronic HIV-1 infection.Journal of immunology (Baltimore, Md. : 1950) · 2026
    Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. Review
  9. MAIT cells and viruses.Immunology and cell biology · 2018
    Review
  10. Development of mucosal-associated invariant T cells.Immunology and cell biology · 2018
    Review
  11. OMIP-046: Characterization of invariant T cell subset activation in humans.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2018
    Article
  12. Mucosal-associated invariant T-cell frequency and function in blood and liver of HCV mono- and HCV/HIV co-infected patients with advanced fibrosis.Liver international : official journal of the International Association for the Study of the Liver · 2018
    Article
  13. Article
  14. Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

James E UssherFrom the Peter Medawar Building for Pathogen Research (JEU, PP, CC, PG, REP, CBW, PK), University of Oxford, Oxford, UK; Department of Microbiology and Immunology (JEU, RFH), University of Otago, Dunedin, New Zealand; Ragon Institute of MGH, MIT and Harvard (CC), Cambridge, Massachusetts, USA; Division of Infectious Diseases (AR), University Hospital Berne and University of Berne, Berne; Division of Infectious Diseases and Hospital Epidemiology and Institute of Medical Virology (HFG), University Hospital Zurich, University of Zurich, Zurich, Switzerland.
Prabhjeet Phalora
Cormac Cosgrove
Rachel F Hannaway
Andri Rauch
Huldrych F Günthard
Philip Goulder
Rodney E Phillips
Christian B Willberg
Paul Klenerman
University Hospital of Bern · CH

Funding

Wellcome Trust 091663Wellcome Trust 104748Wellcome Trust WT091663MA
6 · The paper itself

Abstract

Mucosal-associated invariant T (MAIT) cells are an abundant antibacterial innate-like lymphocyte population. There are conflicting reports as to their fate in HIV infection. The objective of this study was to determine whether MAIT cells are truly depleted in HIV infection. In this case-control study of HIV-positive patients and healthy controls, quantitative real-time polymerase chain reaction was used to assess the abundance of messenger RNA (mRNA) and genomic DNA (gDNA) encoding the canonical MAIT cell T cell receptor (Vα7.2-Jα33). Comparison was made with flow cytometry. Significant depletion of both Vα7.2-Jα33 mRNA and gDNA was seen in HIV infection. Depletion of Vα7.2+CD161++ T cells was confirmed by flow cytometry. In HIV infection, the abundance of Vα7.2-Jα33 mRNA correlated most strongly with the frequency of Vα7.2+CD161++ cells. No increase was observed in the frequency of Vα7.2+CD161- cells among CD3+CD4- lymphocytes. MAIT cells are depleted from blood in HIV infection as confirmed by independent assays. Significant accumulation of a CD161- MAIT cell population is unlikely. Molecular approaches represent a suitable alternative to flow cytometry-based assays for tracking of MAIT cells in HIV and other settings.

Indexed as

AdultCase-Control StudiesFemaleFlow CytometryHIV InfectionsHumansMaleMiddle AgedNatural Killer T-CellsReal-Time Polymerase Chain ReactionRNA, MessengerRNA, Messenger

Identifiers

PMID26200614
PMCPMC4603017
OpenAlexW2317831056

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.