Evidence map›Paper›PMID 26198458›Full record

ArticleJournal of applied genetics2016

Mapping of seedling resistance in barley to Puccinia striiformis f. sp. pseudohordei.

L N Kamino, D Singh, M A Pallotta, N C Collins, R F Park

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of applied genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
1.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 3 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

L N KaminoPlant Breeding Institute (PBI), The University of Sydney, Private Bag 4011, Narellan, NSW, 2567, Australia.
D SinghPlant Breeding Institute (PBI), The University of Sydney, Private Bag 4011, Narellan, NSW, 2567, Australia. davinder.singh@sydney.edu.au.ORCID http://orcid.org/0000-0003-1411-9291
M A PallottaAustralian Centre for Plant Functional Genomics, University of Adelaide, Waite campus, Urrbrae, South Australia, 5064, Australia.
N C CollinsAustralian Centre for Plant Functional Genomics, University of Adelaide, Waite campus, Urrbrae, South Australia, 5064, Australia.
R F ParkPlant Breeding Institute (PBI), The University of Sydney, Private Bag 4011, Narellan, NSW, 2567, Australia.
The University of Sydney · AUAustralian Centre for Plant Functional Genomics · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The barley grass stripe rust (BGYR) pathogen Puccinia striiformis f. sp. pseudohordei was first detected in Australia in 1997. While studies have established that it is virulent on wild barley grass, and can infect several barley cultivars, the basis of genetic resistance to this pathogen in barley is largely unknown. Understanding the genetic basis of host resistance and ensuring the selection of germplasm with multiple resistance genes are important to mitigate the potential impact of BGYR in barley production. Genetic analysis of seedling resistance to BGYR in two barley doubled haploid populations, Amaji Nijo/WI2585 (AN/WI) and Galleon/Haruna Nijo (GL/HN), indicated that resistance is governed by several genes. Marker regression analysis of the seedling resistance data from the AN/WI population detected a major QTL, BGYR_WI1 (resistance contributed by WI2585 with the closest marker explaining 52 % of the total phenotypic effect) on chromosome 1HS, flanked by the loci Xabg59 and Xabc310b at map positions 0.0 and 6.9 cM, respectively. Similarly, a major QTL, BGYR_HN1, (resistance contributed by Haruna Nijo with the closest marker explaining 70 % of the total phenotypic effect) was detected in the GL/HN population and was mapped to 1HS, flanked by the loci Xbcd135 and XHOR1 at map positions 12.8 and 24.5 cM, respectively. In addition, several minor loci that provided resistance against BGYR were detected in both populations. While defined QTL intervals were large, the analysis nonetheless provides new information on sources of major QTL controlling resistance to BGYR.

Indexed as

Quantitative Trait LociBasidiomycotaChromosome MappingDisease ResistanceGenetic MarkersGenotypeHordeumPhenotypePlant DiseasesSeedlingsGenetic MarkersBarley grass stripe rust (BGYR)Formae specialesGene mappingMolecular markersResistance

Identifiers

PMID26198458
OpenAlexW2466543208

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.