ArticleEmerging infectious diseases2015
Real-Time Microbiology Laboratory Surveillance System to Detect Abnormal Events and Emerging Infections, Marseille, France.
Article in Emerging infectious diseases, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.
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Who cites it
21 citing papers in PubMed.
- Rapid and Simple Approaches for Diagnosis ofPolish journal of microbiology · 2022Review
- Control of common viral epidemics but not of SARS-CoV-2 through the application of hygiene and distancing measures.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2022Article
- Electronic information systems for One Health surveillance of antimicrobial resistance: a systematic scoping review.BMJ global health · 2022Article
- Using MALDI-TOF spectra in epidemiological surveillance for the detection of bacterial subgroups with a possible epidemic potential.BMC infectious diseases · 2021Article
- Consequences of the COVID-19 Outbreak Lockdown on Non-Viral Infectious Agents as Reported by a Laboratory-Based Surveillance System at the IHU Méditerranée Infection, Marseille, France.Journal of clinical medicine · 2021Article
- Evaluation of Strategies to Fight COVID-19: The French Paradigm.Journal of clinical medicine · 2021Article
- Major discrepancy between factual antibiotic resistance and consumption in South of France: analysis of 539,037 bacterial strains.Scientific reports · 2020Article
- Automated digital reporting of clinical laboratory information to national public health surveillance systems, results of a EU/EEA survey, 2018.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2020Article
- Comparison of mortality associated with respiratory viral infections between December 2019 and March 2020 with that of the previous year in Southeastern France.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2020Article
- SARS-CoV-2: fear versus data.International journal of antimicrobial agents · 2020Article
- Consolidation of Clinical Microbiology Laboratories and Introduction of Transformative Technologies.Clinical microbiology reviews · 2020Review
- Rapid Scanning Electron Microscopy Detection and Sequencing of Severe Acute Respiratory Syndrome Coronavirus 2 and Other Respiratory Viruses.Frontiers in microbiology · 2020Article
- No global increase in resistance to antibiotics: a snapshot of resistance from 2001 to 2016 in Marseille, France.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2019Article
- Strengthening public health surveillance through blockchain technology.AIMS public health · 2019Review
- Extremely and pandrug-resistant bacteria extra-deaths: myth or reality?European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2018Review
- Using MALDI-TOF MS typing method to decipher outbreak: the case of Staphylococcus saprophyticus causing urinary tract infections (UTIs) in Marseille, France.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2017Article
- Implementation and Initial Analysis of a Laboratory-Based Weekly Biosurveillance System, Provence-Alpes-Côte d'Azur, France.Emerging infectious diseases · 2017Article
- Implementation of Syndromic Surveillance Systems in Two Rural Villages in Senegal.PLoS neglected tropical diseases · 2016Article
- The Point-of-Care Laboratory in Clinical Microbiology.Clinical microbiology reviews · 2016Review
- Citrobacter amalonaticus human urinary tract infections, Marseille, France.New microbes and new infections · 2016Article
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Authors and funding
5 authors.
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Abstract
Infectious diseases are a major threat to humanity, and accurate surveillance is essential. We describe how to implement a laboratory data-based surveillance system in a clinical microbiology laboratory. Two historical Microsoft Excel databases were implemented. The data were then sorted and used to execute the following 2 surveillance systems in Excel: the Bacterial real-time Laboratory-based Surveillance System (BALYSES) for monitoring the number of patients infected with bacterial species isolated at least once in our laboratory during the study periodl and the Marseille Antibiotic Resistance Surveillance System (MARSS), which surveys the primary β-lactam resistance phenotypes for 15 selected bacterial species. The first historical database contained 174,853 identifications of bacteria, and the second contained 12,062 results of antibiotic susceptibility testing. From May 21, 2013, through June 4, 2014, BALYSES and MARSS enabled the detection of 52 abnormal events for 24 bacterial species, leading to 19 official reports. This system is currently being refined and improved.
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