Evidence map›Paper›PMID 26195668›Full record

ArticleThe Journal of cell biology2015

Analysis of the interplay of protein biogenesis factors at the ribosome exit site reveals new role for NAC.

Yvonne Nyathi, Martin R Pool

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.4field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. The Endoplasmic Reticulum and the Fidelity of Nascent Protein Localization.Cold Spring Harbor perspectives in biology · 2023
    Review
  11. Article
  12. Targeting of Proteins for Translocation at the Endoplasmic Reticulum.International journal of molecular sciences · 2022
    Review
  13. Article
  14. Article
  15. Review
  16. Chaperone Interactions at the Ribosome.Cold Spring Harbor perspectives in biology · 2019
    Review
  17. Article
  18. Article
  19. Protein folding and tRNA biology.Biophysical reviews · 2017
    Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yvonne NyathiFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, England, UK.
Martin R PoolFaculty of Life Sciences, University of Manchester, Manchester M13 9PT, England, UK martin.r.pool@manchester.ac.uk.
University of Manchester · GB

Funding

Biotechnology and Biological Sciences Research Council BB/H007202/1Biotechnology and Biological Sciences Research Council H007202/1Wellcome TrustWellcome Trust 097820/Z/11/A
6 · The paper itself

Abstract

The ribosome exit site is a focal point for the interaction of protein-biogenesis factors that guide the fate of nascent polypeptides. These factors include chaperones such as NAC, N-terminal-modifying enzymes like Methionine aminopeptidase (MetAP), and the signal recognition particle (SRP), which targets secretory and membrane proteins to the ER. These factors potentially compete with one another in the short time-window when the nascent chain first emerges at the exit site, suggesting a need for regulation. Here, we show that MetAP contacts the ribosome at the universal adaptor site where it is adjacent to the α subunit of NAC. SRP is also known to contact the ribosome at this site. In the absence of NAC, MetAP and SRP antagonize each other, indicating a novel role for NAC in regulating the access of MetAP and SRP to the ribosome. NAC also functions in SRP-dependent targeting and helps to protect substrates from aggregation before translocation.

Indexed as

Protein BiosynthesisAminopeptidasesBinding SitesDNA-Binding ProteinsMolecular ChaperonesProtein TransportRibosomesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSignal Recognition ParticleAminopeptidasesDNA-Binding ProteinsEGD2 protein, S cerevisiaeMolecular Chaperonesnascent-polypeptide-associated complexSaccharomyces cerevisiae ProteinsSignal Recognition Particle

Identifiers

PMID26195668
PMCPMC4508901
OpenAlexW1958848433

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.