Evidence map›Paper›PMID 26194134›Full record

ArticleRNA (New York, N.Y.)2015

Metazoan tRNA introns generate stable circular RNAs in vivo.

Zhipeng Lu, Grigory S Filonov, John J Noto, Casey A Schmidt, Talia L Hatkevich, Ying Wen, Samie R Jaffrey, A Gregory Matera

Abstract read
In one paragraph

Article in RNA (New York, N.Y.), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 121 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
121citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

121 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Circular RNAs in ferroptosis regulation and tumor progression of gynecological and breast cancers: molecular mechanisms and therapeutic potential.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2026
    Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Many paths to destruction: Family-specific turnover and stress responses for tRNA introns.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Article
  9. Circular RNAs: from transcriptional noise to engineered therapeutics.Frontiers in epigenetics and epigenomics · 2026
    Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. Review
  17. Circular RNAs Binding to RNA-Binding Proteins.Advances in experimental medicine and biology · 2025
    Review
  18. Super-Resolved Protein Imaging Using Bifunctional Light-Up Aptamers.Angewandte Chemie (International ed. in English) · 2024
    Article
  19. Article
  20. Review

61 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Zhipeng LuDepartment of Biology, University of North Carolina, Chapel Hill, North Carolina 27599, USA.
Grigory S FilonovDepartment of Pharmacology, Weill Cornell Medical College, New York, New York 10065, USA.
John J NotoCurriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, North Carolina 27599, USA.
Casey A SchmidtCurriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, North Carolina 27599, USA.
Talia L HatkevichCurriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, North Carolina 27599, USA.
Ying WenIntegrative Program for Biological and Genome Sciences, University of North Carolina, Chapel Hill, North Carolina 27599, USA.
Samie R JaffreyDepartment of Pharmacology, Weill Cornell Medical College, New York, New York 10065, USA.
A Gregory MateraDepartment of Biology, University of North Carolina, Chapel Hill, North Carolina 27599, USA Curriculum in Genetics and Molecular Biology, University of North Carolina, Chapel Hill, North Carolina 27599, USA Integrative Program for Biological and Genome Sciences, University of North Carolina, Chapel Hill, North Carolina 27599, USA Lineberger Comprehensive Cancer Center, University of North Carolina, Chapel Hill, North Carolina 27599, USA Department of Genetics, University of North Carolina, Chapel Hill, North Carolina 27599, USA.

Funding

NRSA IN GENETICST32GM007092 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SEKELSKY, JEFF J. · 1985 to 2019
$5.9M
ORGANIZATION OF RIBONUCLEOPROTEINS IN MAMMALIAN CELLSR01GM053034 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI MATERA, A. GREGORY · 1996 to 2015
$4.3M
Engineering RNA-activated fluorescence switches for RNA imaging and analyte sensiR01NS064516 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI JAFFREY, SAMIE R · 2009 to 2018
$3.6M
NIGMS NIH HHS R01 GM053034NIGMS NIH HHS R01-GM053034-18NIGMS NIH HHS T32 GM007092NIGMS NIH HHS T32-GM007092NINDS NIH HHS R01 NS064516NINDS NIH HHS R01-NS064516-07
6 · The paper itself

Abstract

We report the discovery of a class of abundant circular noncoding RNAs that are produced during metazoan tRNA splicing. These transcripts, termed tRNA intronic circular (tric)RNAs, are conserved features of animal transcriptomes. Biogenesis of tricRNAs requires anciently conserved tRNA sequence motifs and processing enzymes, and their expression is regulated in an age-dependent and tissue-specific manner. Furthermore, we exploited this biogenesis pathway to develop an in vivo expression system for generating "designer" circular RNAs in human cells. Reporter constructs expressing RNA aptamers such as Spinach and Broccoli can be used to follow the transcription and subcellular localization of tricRNAs in living cells. Owing to the superior stability of circular vs. linear RNA isoforms, this expression system has a wide range of potential applications, from basic research to pharmaceutical science.

Indexed as

AnimalsDrosophilaFemaleGenes, ReporterHEK293 CellsHumansIntronsMaleModels, MolecularNucleic Acid ConformationRNARNA, CircularRNA StabilityRNA, TransferTranscriptomeRNARNA, CircularRNA, Transfercircular RNAexpression systemnoncoding RNA, ncRNAtRNA processing

Identifiers

PMID26194134
PMCPMC4536317

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.