Evidence map›Paper›PMID 26192751›Full record

ArticlePloS one2015

Genome-Wide Gene Expression Analysis Shows AKAP13-Mediated PKD1 Signaling Regulates the Transcriptional Response to Cardiac Hypertrophy.

Keven R Johnson, Jessie Nicodemus-Johnson, Mathew J Spindler, Graeme K Carnegie

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 20 citations in OpenAlex.

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  14. A-Kinase Anchoring Protein-Lbc: A Molecular Scaffold Involved in Cardiac Protection.Journal of cardiovascular development and disease · 2018
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Keven R JohnsonDepartment of Pharmacology, College of Medicine, University of Illinois at Chicago, Chicago, 60612, IL, United States of America.
Jessie Nicodemus-JohnsonDepartment of Human Genetics, University of Chicago, Chicago, IL, United States of America.
Mathew J SpindlerGladstone Institute of Cardiovascular Disease, 1650 Owens Street, San Francisco, CA, 94158, United States of America.
Graeme K CarnegieDepartment of Pharmacology, College of Medicine, University of Illinois at Chicago, Chicago, 60612, IL, United States of America.
University of Illinois Chicago · USGladstone Institutes · USUniversity of Chicago · US

Funding

Center for Clinical and Translational ScienceUL1TR000050 · NCATS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI AZAR, DIMITRI T, MERMELSTEIN, ROBIN J. · 2012 to 2014
$9.8M
NCATS NIH HHS UL1 TR000050NCATS NIH HHS UL1TR000050
6 · The paper itself

Abstract

In the heart, scaffolding proteins such as A-Kinase Anchoring Proteins (AKAPs) play a crucial role in normal cellular function by serving as a signaling hub for multiple protein kinases including protein kinase D1 (PKD1). Under cardiac hypertrophic conditions AKAP13 anchored PKD1 activates the transcription factor MEF2 leading to subsequent fetal gene activation and hypertrophic response. We used an expression microarray to identify the global transcriptional response in the hearts of wild-type mice expressing the native form of AKAP13 compared to a gene-trap mouse model expressing a truncated form of AKAP13 that is unable to bind PKD1 (AKAP13-ΔPKD1). Microarray analysis showed that AKAP13-ΔPKD1 mice broadly failed to exhibit the transcriptional profile normally associated with compensatory cardiac hypertrophy following trans-aortic constriction (TAC). The identified differentially expressed genes in WT and AKAP13-ΔPKD1 hearts are vital for the compensatory hypertrophic response to pressure-overload and include myofilament, apoptotic, and cell growth/differentiation genes in addition to genes not previously identified as affected by AKAP13-anchored PKD1. Our results show that AKAP13-PKD1 signaling is critical for transcriptional regulation of key contractile, cell death, and metabolic pathways during the development of compensatory hypertrophy in vivo.

Indexed as

Gene Expression RegulationA Kinase Anchor ProteinsAnimalsCardiomegalyCell DeathGene Expression ProfilingGuanine Nucleotide Exchange FactorsMiceMice, TransgenicMinor Histocompatibility AntigensMyocardial ContractionMyocardiumMyocytes, CardiacProtein Kinase CSignal TransductionTranscription, GeneticAkap13 protein, mouseA Kinase Anchor ProteinsGuanine Nucleotide Exchange FactorsMinor Histocompatibility AntigensProtein Kinase Cprotein kinase D

Identifiers

PMID26192751
PMCPMC4508115
OpenAlexW934647689

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.