Evidence map›Paper›PMID 26191525›Full record

ArticleFrontiers in bioengineering and biotechnology2015

Functional Screening of Hydrolytic Activities Reveals an Extremely Thermostable Cellulase from a Deep-Sea Archaeon.

Benedikt Leis, Simon Heinze, Angel Angelov, Vu Thuy Trang Pham, Andrea Thürmer, Mohamed Jebbar, Peter N Golyshin, Wolfgang R Streit, Rolf Daniel, Wolfgang Liebl

Open access · goldAbstract read
In one paragraph

Article in Frontiers in bioengineering and biotechnology, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
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  3. Article
  4. Review
  5. Article
  6. Review
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  8. Review
  9. Article
  10. Novel Hyperthermophilic CrenarchaeonFrontiers in microbiology · 2019
    Article
  11. Review
  12. Article
  13. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 3 countries.

Benedikt LeisDepartment of Microbiology, School of Life Sciences Weihenstephan, Technische Universität München , Freising-Weihenstephan , Germany.
Simon HeinzeDepartment of Microbiology, School of Life Sciences Weihenstephan, Technische Universität München , Freising-Weihenstephan , Germany.
Angel AngelovDepartment of Microbiology, School of Life Sciences Weihenstephan, Technische Universität München , Freising-Weihenstephan , Germany.
Vu Thuy Trang PhamDepartment of Microbiology, School of Life Sciences Weihenstephan, Technische Universität München , Freising-Weihenstephan , Germany.
Andrea ThürmerGöttingen Genomics Laboratory, Department of Genomic and Applied Microbiology, Georg-August University Göttingen , Göttingen , Germany.
Mohamed JebbarLaboratoire de Microbiologie des Environnements Extrêmes-UMR 6197 (CNRS-Ifremer-UBO), Institut Universitaire Européen de la Mer, Université de Bretagne Occidentale , Plouzané , France.
Peter N GolyshinSchool of Biological Sciences, Bangor University , Bangor , UK.
Wolfgang R StreitFakultät für Mathematik, Informatik und Naturwissenschaften Biologie, Biozentrum Klein Flottbek, Universität Hamburg , Hamburg , Germany.
Rolf DanielGöttingen Genomics Laboratory, Department of Genomic and Applied Microbiology, Georg-August University Göttingen , Göttingen , Germany.
Wolfgang LieblDepartment of Microbiology, School of Life Sciences Weihenstephan, Technische Universität München , Freising-Weihenstephan , Germany.
Technical University of Munich · DEUniversity of Göttingen · DEBangor University · GBUniversität Hamburg · DEUniversité de Bretagne Occidentale · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extreme habitats serve as a source of enzymes that are active under extreme conditions and are candidates for industrial applications. In this work, six large-insert mixed genomic libraries were screened for hydrolase activities in a broad temperature range (8-70°C). Among a variety of hydrolytic activities, one fosmid clone, derived from a library of pooled isolates of hyperthermophilic archaea from deep sea vents, displayed hydrolytic activity on carboxymethyl cellulose substrate plates at 70°C but not at lower temperatures. Sequence analysis of the fosmid insert revealed a gene encoding a novel glycoside hydrolase family 12 (GHF12) endo-1,4-β-glucanase, termed Cel12E. The enzyme shares 45% sequence identity with a protein from the archaeon Thermococcus sp. AM4 and displays a unique multidomain architecture. Biochemical characterization of Cel12E revealed a remarkably thermostable protein, which appears to be of archaeal origin. The enzyme displayed maximum activity at 92°C and was active on a variety of linear 1,4-β-glucans like carboxymethyl cellulose, β-glucan, lichenan, and phosphoric acid swollen cellulose. The protein is able to bind to various insoluble β-glucans. Product pattern analysis indicated that Cel12E is an endo-cleaving β-glucanase. Cel12E expands the toolbox of hyperthermostable archaeal cellulases with biotechnological potential.

Indexed as

archaeal endoglucanaseenzymatic characterizationextreme thermostable proteinfunctional screenings

Identifiers

PMID26191525
PMCPMC4486847
OpenAlexW1580125540

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.