Evidence map›Paper›PMID 26191365›Full record

ArticleACS medicinal chemistry letters2015

Optimization of a Dibenzodiazepine Hit to a Potent and Selective Allosteric PAK1 Inhibitor.

Alexei S Karpov, Payman Amiri, Cornelia Bellamacina, Marie-Helene Bellance, Werner Breitenstein, Dylan Daniel, Regis Denay, Doriano Fabbro, Cesar Fernandez, Inga Galuba and 16 more

Abstract read
In one paragraph

Article in ACS medicinal chemistry letters, 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. PAK1 inhibitor NVS-PAK1-1 preserves dendritic spines in amyloid/tau exposed neurons and 5xFAD mice.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Article
  5. Article
  6. Article
  7. The Role of the p21-Activated Kinase Family in Tumor Immunity.International journal of molecular sciences · 2025
    Review
  8. Article
  9. [Computer-aided prediction and molecular mechanism investigation of active components in compound Kushen injection inhibiting p21-activated kinase 1].Sheng wu yi xue gong cheng xue za zhi = Journal of biomedical engineering = Shengwu yixue gongchengxue zazhi · 2024
    Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Development and Utility of a PAK1-Selective Degrader.Journal of medicinal chemistry · 2022
    Article
  15. Review
  16. Group I PAKs in myelin formation and repair of the central nervous system: what, when, and how.Biological reviews of the Cambridge Philosophical Society · 2022
    Review
  17. Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors.

Alexei S KarpovNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Payman AmiriNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Cornelia BellamacinaNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Marie-Helene BellanceNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Werner BreitensteinNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Dylan DanielNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Regis DenayNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Doriano FabbroNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Cesar FernandezNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Inga GalubaNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Stephanie Guerro-LagasseNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Sascha GutmannNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Linda HinhNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Wolfgang JahnkeNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Julia KloppNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Albert LaiNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Mika K LindvallNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Sylvia MaNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Henrik MöbitzNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Sabina PecchiNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Gabriele RummelNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Kevin ShoemakerNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Joerg TrappeNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Charles VolivaNovartis Institutes for BioMedical Research , 5300 Chiron Way, Emeryville, California 94608, United States.
Sandra W Cowan-JacobNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.
Andreas L MarzinzikNovartis Institutes for BioMedical Research , Novartis Campus, CH-4056 Basel, Switzerland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The discovery of inhibitors targeting novel allosteric kinase sites is very challenging. Such compounds, however, once identified could offer exquisite levels of selectivity across the kinome. Herein we report our structure-based optimization strategy of a dibenzodiazepine hit 1, discovered in a fragment-based screen, yielding highly potent and selective inhibitors of PAK1 such as 2 and 3. Compound 2 was cocrystallized with PAK1 to confirm binding to an allosteric site and to reveal novel key interactions. Compound 3 modulated PAK1 at the cellular level and due to its selectivity enabled valuable research to interrogate biological functions of the PAK1 kinase.

Indexed as

allosteric inhibitordibenzodiazepinep21 activated kinasePAK1tool compound

Identifiers

PMID26191365
PMCPMC4499825

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.